Multiple structure alignment


Structure Superposition
Structure Similarity

  Lcore:   109

  ccRMSD:   1.00Å

  ccTM-score:   0.82

  Lali:   116.10

  RMSD:   1.10Å

  TM-score:   0.87

Select a color scheme


    

    

    
Structure Alignment

Columns in magenta are common core regions (i.e., columns with no gaps and the maximum pairwise residue distance < 4Å).

Phylogenetic tree

Structure-based phylogenetic tree



References

  • Lyu, et al, mTM-align2: a server for real-time protein structure database search and alignment, Genomics, Proteomics & Bioinformatics, in press, (2026).
  • Lyu, et al, Rapid and accurate protein structure database search using inverse folding model and contrastive learning, J Chem Inf Model, 65:13465-13477 (2025). (PDF)