Structure-based phylogenetic tree

Multiple structure alignment

Download the alignment in fasta format
Columns in red are common core regions (i.e., columns with no gaps and the maximum pairwise residue distance < 4Å).

	Number of structures: 6 Metrics Value Lcore   139 ccRMSD   0.54 ccTM-score   0.97 Lali   140.20 RMSD   0.57Å TM-score   0.98     Different views (the default view is: 1).                    Download     The pairwise TM-score and RMSD     Superimposed common core regions     Superimposed all regions
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Reference

R Dong, S Pan, Z Peng, Y Zhang, J Yang, mTM-align: a server for fast protein structure database search and multiple protein structure alignment, Nucleic Acids Research, 46: W380–W386 (2018).

R Dong, Z Peng, Y Zhang, J Yang, mTM-align: an algorithm for fast and accurate multiple protein structure alignment, Bioinformatics, 34: 1719-1725 (2018).