Home
Browse
Browse biologically relevant interactions
Browse biologically irrelevant interactions
Browse structures with ligands or proteins only
Search
Ligand
Q-SITE
Download
Statistics
Help
Yang Lab
Function Annotation for BL3048483
3D View
More Information
data_198d_1 # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_alt_id _atom_site.label_comp_id _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.label_seq_id _atom_site.pdbx_PDB_ins_code _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_seq_id _atom_site.auth_comp_id _atom_site.auth_asym_id _atom_site.auth_atom_id _atom_site.pdbx_PDB_model_num HETATM 1 O "O5'" . DC A 1 1 ? 18.920 15.788 6.911 1.00 22.29 ? 1 DC A "O5'" 1 HETATM 2 C "C5'" . DC A 1 1 ? 17.515 15.926 6.547 1.00 21.75 ? 1 DC A "C5'" 1 HETATM 3 C "C4'" . DC A 1 1 ? 17.277 17.349 6.051 1.00 20.60 ? 1 DC A "C4'" 1 HETATM 4 O "O4'" . DC A 1 1 ? 16.402 18.037 6.977 1.00 18.80 ? 1 DC A "O4'" 1 HETATM 5 C "C3'" . DC A 1 1 ? 18.469 18.221 5.819 1.00 19.65 ? 1 DC A "C3'" 1 HETATM 6 O "O3'" . DC A 1 1 ? 18.628 18.496 4.398 1.00 25.19 ? 1 DC A "O3'" 1 HETATM 7 C "C2'" . DC A 1 1 ? 18.178 19.552 6.514 1.00 17.07 ? 1 DC A "C2'" 1 HETATM 8 C "C1'" . DC A 1 1 ? 16.879 19.322 7.241 1.00 12.74 ? 1 DC A "C1'" 1 HETATM 9 N N1 . DC A 1 1 ? 16.879 19.598 8.663 1.00 7.40 ? 1 DC A N1 1 HETATM 10 C C2 . DC A 1 1 ? 16.879 20.883 9.093 1.00 4.86 ? 1 DC A C2 1 HETATM 11 O O2 . DC A 1 1 ? 16.932 21.801 8.266 1.00 7.20 ? 1 DC A O2 1 HETATM 12 N N3 . DC A 1 1 ? 16.879 21.158 10.382 1.00 3.65 ? 1 DC A N3 1 HETATM 13 C C4 . DC A 1 1 ? 16.853 20.194 11.308 1.00 2.49 ? 1 DC A C4 1 HETATM 14 N N4 . DC A 1 1 ? 16.800 20.561 12.598 1.00 2.66 ? 1 DC A N4 1 HETATM 15 C C5 . DC A 1 1 ? 16.879 18.863 10.911 1.00 4.78 ? 1 DC A C5 1 HETATM 16 C C6 . DC A 1 1 ? 16.932 18.588 9.589 1.00 7.02 ? 1 DC A C6 1 HETATM 17 P P . DG A 1 2 ? 19.926 17.899 3.571 1.00 28.08 ? 2 DG A P 1 HETATM 18 O OP1 . DG A 1 2 ? 19.450 17.899 2.149 1.00 26.76 ? 2 DG A OP1 1 HETATM 19 O OP2 . DG A 1 2 ? 20.403 16.614 4.166 1.00 24.67 ? 2 DG A OP2 1 HETATM 20 O "O5'" . DG A 1 2 ? 20.960 19.047 3.869 1.00 25.43 ? 2 DG A "O5'" 1 HETATM 21 C "C5'" . DG A 1 2 ? 20.880 20.378 3.306 1.00 24.43 ? 2 DG A "C5'" 1 HETATM 22 C "C4'" . DG A 1 2 ? 22.099 21.112 3.869 1.00 22.68 ? 2 DG A "C4'" 1 HETATM 23 O "O4'" . DG A 1 2 ? 22.020 21.158 5.323 1.00 20.81 ? 2 DG A "O4'" 1 HETATM 24 C "C3'" . DG A 1 2 ? 23.451 20.424 3.571 1.00 23.45 ? 2 DG A "C3'" 1 HETATM 25 O "O3'" . DG A 1 2 ? 24.431 21.387 3.207 1.00 26.11 ? 2 DG A "O3'" 1 HETATM 26 C "C2'" . DG A 1 2 ? 23.822 19.781 4.894 1.00 20.79 ? 2 DG A "C2'" 1 HETATM 27 C "C1'" . DG A 1 2 ? 23.292 20.791 5.853 1.00 17.28 ? 2 DG A "C1'" 1 HETATM 28 N N9 . DG A 1 2 ? 23.265 20.194 7.208 1.00 12.79 ? 2 DG A N9 1 HETATM 29 C C8 . DG A 1 2 ? 23.212 18.909 7.605 1.00 13.09 ? 2 DG A C8 1 HETATM 30 N N7 . DG A 1 2 ? 23.265 18.726 8.894 1.00 13.23 ? 2 DG A N7 1 HETATM 31 C C5 . DG A 1 2 ? 23.371 20.011 9.390 1.00 11.09 ? 2 DG A C5 1 HETATM 32 C C6 . DG A 1 2 ? 23.530 20.470 10.713 1.00 10.07 ? 2 DG A C6 1 HETATM 33 O O6 . DG A 1 2 ? 23.557 19.781 11.771 1.00 13.06 ? 2 DG A O6 1 HETATM 34 N N1 . DG A 1 2 ? 23.663 21.801 10.812 1.00 9.69 ? 2 DG A N1 1 HETATM 35 C C2 . DG A 1 2 ? 23.610 22.627 9.721 1.00 9.84 ? 2 DG A C2 1 HETATM 36 N N2 . DG A 1 2 ? 23.742 23.958 9.953 1.00 8.05 ? 2 DG A N2 1 HETATM 37 N N3 . DG A 1 2 ? 23.504 22.260 8.465 1.00 11.19 ? 2 DG A N3 1 HETATM 38 C C4 . DG A 1 2 ? 23.424 20.929 8.365 1.00 10.85 ? 2 DG A C4 1 HETATM 39 P P . DA A 1 3 ? 24.882 21.709 1.752 1.00 28.02 ? 3 DA A P 1 HETATM 40 O OP1 . DA A 1 3 ? 23.663 21.801 0.860 1.00 27.73 ? 3 DA A OP1 1 HETATM 41 O OP2 . DA A 1 3 ? 25.915 20.745 1.356 1.00 26.95 ? 3 DA A OP2 1 HETATM 42 O "O5'" . DA A 1 3 ? 25.518 23.177 2.017 1.00 26.15 ? 3 DA A "O5'" 1 HETATM 43 C "C5'" . DA A 1 3 ? 24.723 24.371 2.315 1.00 23.17 ? 3 DA A "C5'" 1 HETATM 44 C "C4'" . DA A 1 3 ? 25.465 25.380 3.141 1.00 19.43 ? 3 DA A "C4'" 1 HETATM 45 O "O4'" . DA A 1 3 ? 25.359 25.105 4.530 1.00 17.23 ? 3 DA A "O4'" 1 HETATM 46 C "C3'" . DA A 1 3 ? 26.975 25.610 2.844 1.00 20.80 ? 3 DA A "C3'" 1 HETATM 47 O "O3'" . DA A 1 3 ? 27.107 27.033 2.678 1.00 23.56 ? 3 DA A "O3'" 1 HETATM 48 C "C2'" . DA A 1 3 ? 27.637 25.013 4.034 1.00 18.27 ? 3 DA A "C2'" 1 HETATM 49 C "C1'" . DA A 1 3 ? 26.657 24.967 5.158 1.00 13.48 ? 3 DA A "C1'" 1 HETATM 50 N N9 . DA A 1 3 ? 26.683 23.636 5.853 1.00 11.43 ? 3 DA A N9 1 HETATM 51 C C8 . DA A 1 3 ? 26.710 22.397 5.323 1.00 9.84 ? 3 DA A C8 1 HETATM 52 N N7 . DA A 1 3 ? 26.789 21.433 6.216 1.00 10.16 ? 3 DA A N7 1 HETATM 53 C C5 . DA A 1 3 ? 26.789 22.076 7.440 1.00 8.04 ? 3 DA A C5 1 HETATM 54 C C6 . DA A 1 3 ? 26.842 21.617 8.729 1.00 7.90 ? 3 DA A C6 1 HETATM 55 N N6 . DA A 1 3 ? 26.869 20.378 9.126 1.00 7.71 ? 3 DA A N6 1 HETATM 56 N N1 . DA A 1 3 ? 26.816 22.581 9.688 1.00 6.44 ? 3 DA A N1 1 HETATM 57 C C2 . DA A 1 3 ? 26.789 23.912 9.390 1.00 7.43 ? 3 DA A C2 1 HETATM 58 N N3 . DA A 1 3 ? 26.710 24.417 8.167 1.00 9.66 ? 3 DA A N3 1 HETATM 59 C C4 . DA A 1 3 ? 26.736 23.453 7.241 1.00 8.16 ? 3 DA A C4 1 HETATM 60 P P . DT A 1 4 ? 28.406 27.905 2.546 1.00 23.66 ? 4 DT A P 1 HETATM 61 O OP1 . DT A 1 4 ? 28.061 29.327 2.248 1.00 25.66 ? 4 DT A OP1 1 HETATM 62 O OP2 . DT A 1 4 ? 29.254 27.262 1.554 1.00 22.56 ? 4 DT A OP2 1 HETATM 63 O "O5'" . DT A 1 4 ? 28.962 27.859 4.034 1.00 21.37 ? 4 DT A "O5'" 1 HETATM 64 C "C5'" . DT A 1 4 ? 28.273 28.685 5.026 1.00 18.67 ? 4 DT A "C5'" 1 HETATM 65 C "C4'" . DT A 1 4 ? 29.042 28.547 6.315 1.00 17.50 ? 4 DT A "C4'" 1 HETATM 66 O "O4'" . DT A 1 4 ? 28.883 27.262 6.844 1.00 16.53 ? 4 DT A "O4'" 1 HETATM 67 C "C3'" . DT A 1 4 ? 30.526 28.823 6.249 1.00 18.40 ? 4 DT A "C3'" 1 HETATM 68 O "O3'" . DT A 1 4 ? 30.817 29.878 7.109 1.00 21.42 ? 4 DT A "O3'" 1 HETATM 69 C "C2'" . DT A 1 4 ? 31.162 27.538 6.712 1.00 17.16 ? 4 DT A "C2'" 1 HETATM 70 C "C1'" . DT A 1 4 ? 30.102 26.895 7.539 1.00 13.23 ? 4 DT A "C1'" 1 HETATM 71 N N1 . DT A 1 4 ? 30.155 25.426 7.572 1.00 10.00 ? 4 DT A N1 1 HETATM 72 C C2 . DT A 1 4 ? 30.049 24.876 8.828 1.00 9.66 ? 4 DT A C2 1 HETATM 73 O O2 . DT A 1 4 ? 29.943 25.518 9.886 1.00 10.80 ? 4 DT A O2 1 HETATM 74 N N3 . DT A 1 4 ? 30.102 23.499 8.861 1.00 8.86 ? 4 DT A N3 1 HETATM 75 C C4 . DT A 1 4 ? 30.208 22.673 7.770 1.00 7.43 ? 4 DT A C4 1 HETATM 76 O O4 . DT A 1 4 ? 30.208 21.479 7.936 1.00 10.18 ? 4 DT A O4 1 HETATM 77 C C5 . DT A 1 4 ? 30.367 23.315 6.514 1.00 8.78 ? 4 DT A C5 1 HETATM 78 C C7 . DT A 1 4 ? 30.499 22.535 5.257 1.00 6.92 ? 4 DT A C7 1 HETATM 79 C C6 . DT A 1 4 ? 30.261 24.692 6.448 1.00 9.13 ? 4 DT A C6 1 HETATM 80 P P . DC A 1 5 ? 31.983 30.980 7.010 1.00 21.19 ? 5 DC A P 1 HETATM 81 O OP1 . DC A 1 5 ? 31.453 32.265 7.572 1.00 23.58 ? 5 DC A OP1 1 HETATM 82 O OP2 . DC A 1 5 ? 32.407 31.072 5.588 1.00 21.74 ? 5 DC A OP2 1 HETATM 83 O "O5'" . DC A 1 5 ? 33.043 30.429 8.035 1.00 20.11 ? 5 DC A "O5'" 1 HETATM 84 C "C5'" . DC A 1 5 ? 32.672 30.337 9.424 1.00 18.34 ? 5 DC A "C5'" 1 HETATM 85 C "C4'" . DC A 1 5 ? 33.652 29.282 10.019 1.00 17.28 ? 5 DC A "C4'" 1 HETATM 86 O "O4'" . DC A 1 5 ? 33.202 27.951 9.655 1.00 16.69 ? 5 DC A "O4'" 1 HETATM 87 C "C3'" . DC A 1 5 ? 35.110 29.419 9.490 1.00 16.45 ? 5 DC A "C3'" 1 HETATM 88 O "O3'" . DC A 1 5 ? 36.064 29.419 10.515 1.00 18.76 ? 5 DC A "O3'" 1 HETATM 89 C "C2'" . DC A 1 5 ? 35.242 28.272 8.564 1.00 14.27 ? 5 DC A "C2'" 1 HETATM 90 C "C1'" . DC A 1 5 ? 34.288 27.262 9.126 1.00 11.70 ? 5 DC A "C1'" 1 HETATM 91 N N1 . DC A 1 5 ? 33.997 26.115 8.233 1.00 7.59 ? 5 DC A N1 1 HETATM 92 C C2 . DC A 1 5 ? 33.705 24.967 8.894 1.00 5.60 ? 5 DC A C2 1 HETATM 93 O O2 . DC A 1 5 ? 33.546 24.967 10.118 1.00 7.20 ? 5 DC A O2 1 HETATM 94 N N3 . DC A 1 5 ? 33.573 23.820 8.200 1.00 5.74 ? 5 DC A N3 1 HETATM 95 C C4 . DC A 1 5 ? 33.705 23.774 6.878 1.00 7.27 ? 5 DC A C4 1 HETATM 96 N N4 . DC A 1 5 ? 33.599 22.581 6.216 1.00 6.62 ? 5 DC A N4 1 HETATM 97 C C5 . DC A 1 5 ? 33.970 24.967 6.150 1.00 6.24 ? 5 DC A C5 1 HETATM 98 C C6 . DC A 1 5 ? 34.156 26.115 6.878 1.00 7.23 ? 5 DC A C6 1 HETATM 99 P P . DG A 1 6 ? 36.859 30.796 10.911 1.00 18.11 ? 6 DG A P 1 HETATM 100 O OP1 . DG A 1 6 ? 35.852 31.898 11.011 1.00 19.19 ? 6 DG A OP1 1 HETATM 101 O OP2 . DG A 1 6 ? 37.919 30.980 9.886 1.00 18.11 ? 6 DG A OP2 1 HETATM 102 O "O5'" . DG A 1 6 ? 37.442 30.429 12.333 1.00 16.15 ? 6 DG A "O5'" 1 HETATM 103 C "C5'" . DG A 1 6 ? 36.673 29.649 13.259 1.00 15.25 ? 6 DG A "C5'" 1 HETATM 104 C "C4'" . DG A 1 6 ? 37.733 28.914 14.185 1.00 14.83 ? 6 DG A "C4'" 1 HETATM 105 O "O4'" . DG A 1 6 ? 38.131 27.675 13.689 1.00 16.18 ? 6 DG A "O4'" 1 HETATM 106 C "C3'" . DG A 1 6 ? 38.952 29.741 14.449 1.00 13.01 ? 6 DG A "C3'" 1 HETATM 107 O "O3'" . DG A 1 6 ? 39.111 29.741 15.871 1.00 14.76 ? 6 DG A "O3'" 1 HETATM 108 C "C2'" . DG A 1 6 ? 39.985 29.052 13.557 1.00 13.44 ? 6 DG A "C2'" 1 HETATM 109 C "C1'" . DG A 1 6 ? 39.588 27.629 13.424 1.00 10.47 ? 6 DG A "C1'" 1 HETATM 110 N N9 . DG A 1 6 ? 39.694 26.987 12.069 1.00 6.93 ? 6 DG A N9 1 HETATM 111 C C8 . DG A 1 6 ? 39.694 27.538 10.812 1.00 6.35 ? 6 DG A C8 1 HETATM 112 N N7 . DG A 1 6 ? 39.800 26.711 9.853 1.00 4.73 ? 6 DG A N7 1 HETATM 113 C C5 . DG A 1 6 ? 39.932 25.472 10.515 1.00 3.97 ? 6 DG A C5 1 HETATM 114 C C6 . DG A 1 6 ? 40.065 24.141 10.019 1.00 4.16 ? 6 DG A C6 1 HETATM 115 O O6 . DG A 1 6 ? 40.118 23.774 8.861 1.00 4.40 ? 6 DG A O6 1 HETATM 116 N N1 . DG A 1 6 ? 40.144 23.177 11.011 1.00 2.34 ? 6 DG A N1 1 HETATM 117 C C2 . DG A 1 6 ? 40.144 23.453 12.300 1.00 2.00 ? 6 DG A C2 1 HETATM 118 N N2 . DG A 1 6 ? 40.250 22.443 13.127 1.00 3.41 ? 6 DG A N2 1 HETATM 119 N N3 . DG A 1 6 ? 39.959 24.692 12.829 1.00 4.87 ? 6 DG A N3 1 HETATM 120 C C4 . DG A 1 6 ? 39.879 25.656 11.870 1.00 3.96 ? 6 DG A C4 1 HETATM 121 O "O5'" . DC B 1 1 ? 39.826 15.008 8.696 1.00 17.98 ? 7 DC B "O5'" 1 HETATM 122 C "C5'" . DC B 1 1 ? 38.793 14.687 9.655 1.00 19.92 ? 7 DC B "C5'" 1 HETATM 123 C "C4'" . DC B 1 1 ? 39.244 14.916 11.110 1.00 19.88 ? 7 DC B "C4'" 1 HETATM 124 O "O4'" . DC B 1 1 ? 40.330 15.788 11.143 1.00 17.54 ? 7 DC B "O4'" 1 HETATM 125 C "C3'" . DC B 1 1 ? 38.210 15.513 12.036 1.00 20.35 ? 7 DC B "C3'" 1 HETATM 126 O "O3'" . DC B 1 1 ? 38.316 15.054 13.358 1.00 24.00 ? 7 DC B "O3'" 1 HETATM 127 C "C2'" . DC B 1 1 ? 38.475 16.981 12.003 1.00 17.82 ? 7 DC B "C2'" 1 HETATM 128 C "C1'" . DC B 1 1 ? 39.959 17.073 11.672 1.00 14.02 ? 7 DC B "C1'" 1 HETATM 129 N N1 . DC B 1 1 ? 40.118 18.175 10.680 1.00 8.65 ? 7 DC B N1 1 HETATM 130 C C2 . DC B 1 1 ? 40.224 19.460 11.176 1.00 6.66 ? 7 DC B C2 1 HETATM 131 O O2 . DC B 1 1 ? 40.250 19.598 12.399 1.00 7.12 ? 7 DC B O2 1 HETATM 132 N N3 . DC B 1 1 ? 40.356 20.424 10.283 1.00 5.76 ? 7 DC B N3 1 HETATM 133 C C4 . DC B 1 1 ? 40.330 20.194 8.928 1.00 5.44 ? 7 DC B C4 1 HETATM 134 N N4 . DC B 1 1 ? 40.436 21.204 8.101 1.00 6.14 ? 7 DC B N4 1 HETATM 135 C C5 . DC B 1 1 ? 40.277 18.909 8.432 1.00 5.77 ? 7 DC B C5 1 HETATM 136 C C6 . DC B 1 1 ? 40.224 17.899 9.324 1.00 7.89 ? 7 DC B C6 1 HETATM 137 P P . DG B 1 2 ? 37.177 14.182 14.119 1.00 26.64 ? 8 DG B P 1 HETATM 138 O OP1 . DG B 1 2 ? 37.892 13.677 15.342 1.00 25.77 ? 8 DG B OP1 1 HETATM 139 O OP2 . DG B 1 2 ? 36.673 13.126 13.193 1.00 26.92 ? 8 DG B OP2 1 HETATM 140 O "O5'" . DG B 1 2 ? 36.011 15.192 14.482 1.00 24.72 ? 8 DG B "O5'" 1 HETATM 141 C "C5'" . DG B 1 2 ? 36.143 16.247 15.474 1.00 20.99 ? 8 DG B "C5'" 1 HETATM 142 C "C4'" . DG B 1 2 ? 35.083 17.349 15.243 1.00 17.82 ? 8 DG B "C4'" 1 HETATM 143 O "O4'" . DG B 1 2 ? 35.136 17.808 13.887 1.00 16.34 ? 8 DG B "O4'" 1 HETATM 144 C "C3'" . DG B 1 2 ? 33.652 16.890 15.474 1.00 18.12 ? 8 DG B "C3'" 1 HETATM 145 O "O3'" . DG B 1 2 ? 33.149 17.670 16.532 1.00 20.13 ? 8 DG B "O3'" 1 HETATM 146 C "C2'" . DG B 1 2 ? 32.990 17.027 14.152 1.00 15.05 ? 8 DG B "C2'" 1 HETATM 147 C "C1'" . DG B 1 2 ? 33.811 18.083 13.457 1.00 10.71 ? 8 DG B "C1'" 1 HETATM 148 N N9 . DG B 1 2 ? 33.705 18.175 12.003 1.00 8.22 ? 8 DG B N9 1 HETATM 149 C C8 . DG B 1 2 ? 33.758 17.257 10.978 1.00 7.67 ? 8 DG B C8 1 HETATM 150 N N7 . DG B 1 2 ? 33.732 17.762 9.787 1.00 8.87 ? 8 DG B N7 1 HETATM 151 C C5 . DG B 1 2 ? 33.626 19.139 9.986 1.00 6.15 ? 8 DG B C5 1 HETATM 152 C C6 . DG B 1 2 ? 33.546 20.194 9.093 1.00 4.66 ? 8 DG B C6 1 HETATM 153 O O6 . DG B 1 2 ? 33.520 20.240 7.836 1.00 6.25 ? 8 DG B O6 1 HETATM 154 N N1 . DG B 1 2 ? 33.467 21.433 9.754 1.00 3.72 ? 8 DG B N1 1 HETATM 155 C C2 . DG B 1 2 ? 33.467 21.525 11.110 1.00 2.61 ? 8 DG B C2 1 HETATM 156 N N2 . DG B 1 2 ? 33.414 22.718 11.639 1.00 5.58 ? 8 DG B N2 1 HETATM 157 N N3 . DG B 1 2 ? 33.546 20.561 11.936 1.00 3.54 ? 8 DG B N3 1 HETATM 158 C C4 . DG B 1 2 ? 33.652 19.368 11.341 1.00 5.61 ? 8 DG B C4 1 HETATM 159 P P . DA B 1 3 ? 32.089 17.119 17.591 1.00 21.70 ? 9 DA B P 1 HETATM 160 O OP1 . DA B 1 3 ? 32.672 16.477 18.781 1.00 23.09 ? 9 DA B OP1 1 HETATM 161 O OP2 . DA B 1 3 ? 31.135 16.293 16.797 1.00 23.02 ? 9 DA B OP2 1 HETATM 162 O "O5'" . DA B 1 3 ? 31.453 18.496 18.120 1.00 23.19 ? 9 DA B "O5'" 1 HETATM 163 C "C5'" . DA B 1 3 ? 32.275 19.460 18.781 1.00 21.67 ? 9 DA B "C5'" 1 HETATM 164 C "C4'" . DA B 1 3 ? 31.745 20.837 18.351 1.00 20.12 ? 9 DA B "C4'" 1 HETATM 165 O "O4'" . DA B 1 3 ? 31.824 20.974 16.929 1.00 18.55 ? 9 DA B "O4'" 1 HETATM 166 C "C3'" . DA B 1 3 ? 30.340 21.066 18.781 1.00 20.49 ? 9 DA B "C3'" 1 HETATM 167 O "O3'" . DA B 1 3 ? 30.340 22.168 19.707 1.00 22.20 ? 9 DA B "O3'" 1 HETATM 168 C "C2'" . DA B 1 3 ? 29.545 21.250 17.458 1.00 17.96 ? 9 DA B "C2'" 1 HETATM 169 C "C1'" . DA B 1 3 ? 30.605 21.525 16.367 1.00 14.99 ? 9 DA B "C1'" 1 HETATM 170 N N9 . DA B 1 3 ? 30.446 20.883 15.045 1.00 11.10 ? 9 DA B N9 1 HETATM 171 C C8 . DA B 1 3 ? 30.314 19.552 14.714 1.00 7.25 ? 9 DA B C8 1 HETATM 172 N N7 . DA B 1 3 ? 30.261 19.276 13.424 1.00 10.38 ? 9 DA B N7 1 HETATM 173 C C5 . DA B 1 3 ? 30.314 20.561 12.862 1.00 5.89 ? 9 DA B C5 1 HETATM 174 C C6 . DA B 1 3 ? 30.208 21.020 11.507 1.00 6.61 ? 9 DA B C6 1 HETATM 175 N N6 . DA B 1 3 ? 30.102 20.194 10.482 1.00 8.58 ? 9 DA B N6 1 HETATM 176 N N1 . DA B 1 3 ? 30.287 22.351 11.308 1.00 4.86 ? 9 DA B N1 1 HETATM 177 C C2 . DA B 1 3 ? 30.393 23.177 12.366 1.00 6.00 ? 9 DA B C2 1 HETATM 178 N N3 . DA B 1 3 ? 30.473 22.856 13.656 1.00 7.55 ? 9 DA B N3 1 HETATM 179 C C4 . DA B 1 3 ? 30.393 21.525 13.821 1.00 8.20 ? 9 DA B C4 1 HETATM 180 P P . DT B 1 4 ? 29.042 22.673 20.566 1.00 25.95 ? 10 DT B P 1 HETATM 181 O OP1 . DT B 1 4 ? 29.519 23.590 21.658 1.00 24.34 ? 10 DT B OP1 1 HETATM 182 O OP2 . DT B 1 4 ? 28.379 21.433 21.029 1.00 24.98 ? 10 DT B OP2 1 HETATM 183 O "O5'" . DT B 1 4 ? 28.247 23.499 19.409 1.00 24.13 ? 10 DT B "O5'" 1 HETATM 184 C "C5'" . DT B 1 4 ? 28.830 24.692 18.847 1.00 23.71 ? 10 DT B "C5'" 1 HETATM 185 C "C4'" . DT B 1 4 ? 28.247 25.059 17.491 1.00 23.17 ? 10 DT B "C4'" 1 HETATM 186 O "O4'" . DT B 1 4 ? 28.273 24.004 16.532 1.00 21.27 ? 10 DT B "O4'" 1 HETATM 187 C "C3'" . DT B 1 4 ? 26.789 25.472 17.558 1.00 24.51 ? 10 DT B "C3'" 1 HETATM 188 O "O3'" . DT B 1 4 ? 26.736 26.849 17.888 1.00 26.70 ? 10 DT B "O3'" 1 HETATM 189 C "C2'" . DT B 1 4 ? 26.207 25.105 16.169 1.00 23.14 ? 10 DT B "C2'" 1 HETATM 190 C "C1'" . DT B 1 4 ? 27.372 24.463 15.441 1.00 19.98 ? 10 DT B "C1'" 1 HETATM 191 N N1 . DT B 1 4 ? 27.107 23.269 14.549 1.00 17.16 ? 10 DT B N1 1 HETATM 192 C C2 . DT B 1 4 ? 27.028 23.499 13.193 1.00 16.62 ? 10 DT B C2 1 HETATM 193 O O2 . DT B 1 4 ? 27.134 24.600 12.664 1.00 17.98 ? 10 DT B O2 1 HETATM 194 N N3 . DT B 1 4 ? 26.816 22.397 12.399 1.00 15.41 ? 10 DT B N3 1 HETATM 195 C C4 . DT B 1 4 ? 26.710 21.112 12.829 1.00 14.81 ? 10 DT B C4 1 HETATM 196 O O4 . DT B 1 4 ? 26.551 20.194 12.036 1.00 14.20 ? 10 DT B O4 1 HETATM 197 C C5 . DT B 1 4 ? 26.816 20.929 14.284 1.00 16.01 ? 10 DT B C5 1 HETATM 198 C C7 . DT B 1 4 ? 26.657 19.552 14.879 1.00 15.63 ? 10 DT B C7 1 HETATM 199 C C6 . DT B 1 4 ? 27.001 21.984 15.078 1.00 17.05 ? 10 DT B C6 1 HETATM 200 P P . DC B 1 5 ? 25.597 27.538 18.781 1.00 27.91 ? 11 DC B P 1 HETATM 201 O OP1 . DC B 1 5 ? 25.995 28.960 19.112 1.00 27.48 ? 11 DC B OP1 1 HETATM 202 O OP2 . DC B 1 5 ? 25.359 26.666 19.938 1.00 27.21 ? 11 DC B OP2 1 HETATM 203 O "O5'" . DC B 1 5 ? 24.352 27.583 17.723 1.00 27.12 ? 11 DC B "O5'" 1 HETATM 204 C "C5'" . DC B 1 5 ? 24.405 28.593 16.698 1.00 24.95 ? 11 DC B "C5'" 1 HETATM 205 C "C4'" . DC B 1 5 ? 23.583 28.272 15.474 1.00 23.55 ? 11 DC B "C4'" 1 HETATM 206 O "O4'" . DC B 1 5 ? 24.034 27.033 14.912 1.00 23.75 ? 11 DC B "O4'" 1 HETATM 207 C "C3'" . DC B 1 5 ? 22.073 28.134 15.772 1.00 23.54 ? 11 DC B "C3'" 1 HETATM 208 O "O3'" . DC B 1 5 ? 21.278 28.777 14.747 1.00 23.65 ? 11 DC B "O3'" 1 HETATM 209 C "C2'" . DC B 1 5 ? 21.834 26.620 15.739 1.00 21.12 ? 11 DC B "C2'" 1 HETATM 210 C "C1'" . DC B 1 5 ? 22.868 26.207 14.747 1.00 19.18 ? 11 DC B "C1'" 1 HETATM 211 N N1 . DC B 1 5 ? 23.133 24.738 14.747 1.00 14.00 ? 11 DC B N1 1 HETATM 212 C C2 . DC B 1 5 ? 23.504 24.187 13.524 1.00 13.50 ? 11 DC B C2 1 HETATM 213 O O2 . DC B 1 5 ? 23.689 24.876 12.532 1.00 14.40 ? 11 DC B O2 1 HETATM 214 N N3 . DC B 1 5 ? 23.583 22.856 13.424 1.00 12.01 ? 11 DC B N3 1 HETATM 215 C C4 . DC B 1 5 ? 23.424 22.030 14.482 1.00 12.13 ? 11 DC B C4 1 HETATM 216 N N4 . DC B 1 5 ? 23.557 20.699 14.350 1.00 13.34 ? 11 DC B N4 1 HETATM 217 C C5 . DC B 1 5 ? 23.053 22.581 15.739 1.00 12.41 ? 11 DC B C5 1 HETATM 218 C C6 . DC B 1 5 ? 22.947 23.958 15.838 1.00 13.35 ? 11 DC B C6 1 HETATM 219 P P . DG B 1 6 ? 20.456 30.108 15.045 1.00 23.80 ? 12 DG B P 1 HETATM 220 O OP1 . DG B 1 6 ? 21.251 31.026 15.937 1.00 24.68 ? 12 DG B OP1 1 HETATM 221 O OP2 . DG B 1 6 ? 19.158 29.695 15.640 1.00 24.76 ? 12 DG B OP2 1 HETATM 222 O "O5'" . DG B 1 6 ? 20.191 30.750 13.590 1.00 21.21 ? 12 DG B "O5'" 1 HETATM 223 C "C5'" . DG B 1 6 ? 20.138 29.832 12.466 1.00 18.35 ? 12 DG B "C5'" 1 HETATM 224 C "C4'" . DG B 1 6 ? 19.291 30.383 11.308 1.00 15.78 ? 12 DG B "C4'" 1 HETATM 225 O "O4'" . DG B 1 6 ? 18.655 29.282 10.614 1.00 12.76 ? 12 DG B "O4'" 1 HETATM 226 C "C3'" . DG B 1 6 ? 18.098 31.255 11.705 1.00 15.16 ? 12 DG B "C3'" 1 HETATM 227 O "O3'" . DG B 1 6 ? 17.621 31.989 10.548 1.00 18.39 ? 12 DG B "O3'" 1 HETATM 228 C "C2'" . DG B 1 6 ? 17.118 30.199 12.135 1.00 13.40 ? 12 DG B "C2'" 1 HETATM 229 C "C1'" . DG B 1 6 ? 17.409 28.960 11.275 1.00 10.86 ? 12 DG B "C1'" 1 HETATM 230 N N9 . DG B 1 6 ? 17.356 27.767 12.135 1.00 7.96 ? 12 DG B N9 1 HETATM 231 C C8 . DG B 1 6 ? 17.383 27.629 13.491 1.00 7.62 ? 12 DG B C8 1 HETATM 232 N N7 . DG B 1 6 ? 17.250 26.390 13.953 1.00 6.17 ? 12 DG B N7 1 HETATM 233 C C5 . DG B 1 6 ? 17.144 25.656 12.763 1.00 5.93 ? 12 DG B C5 1 HETATM 234 C C6 . DG B 1 6 ? 16.985 24.279 12.565 1.00 3.76 ? 12 DG B C6 1 HETATM 235 O O6 . DG B 1 6 ? 16.906 23.407 13.457 1.00 5.85 ? 12 DG B O6 1 HETATM 236 N N1 . DG B 1 6 ? 16.985 23.912 11.242 1.00 3.01 ? 12 DG B N1 1 HETATM 237 C C2 . DG B 1 6 ? 17.038 24.830 10.217 1.00 2.46 ? 12 DG B C2 1 HETATM 238 N N2 . DG B 1 6 ? 17.038 24.371 8.994 1.00 2.11 ? 12 DG B N2 1 HETATM 239 N N3 . DG B 1 6 ? 17.197 26.115 10.349 1.00 3.89 ? 12 DG B N3 1 HETATM 240 C C4 . DG B 1 6 ? 17.250 26.482 11.639 1.00 5.73 ? 12 DG B C4 1 HETATM 481 C C1 . DM5 E 2 . ? 37.362 20.929 6.117 1.00 2.33 ? 25 DM5 A C1 1 HETATM 482 C C2 . DM5 E 2 . ? 37.442 21.617 4.894 1.00 2.74 ? 25 DM5 A C2 1 HETATM 483 C C3 . DM5 E 2 . ? 37.362 23.040 4.761 1.00 2.43 ? 25 DM5 A C3 1 HETATM 484 C C4 . DM5 E 2 . ? 37.177 23.820 5.952 1.00 2.58 ? 25 DM5 A C4 1 HETATM 485 C C5 . DM5 E 2 . ? 37.124 23.086 7.175 1.00 2.47 ? 25 DM5 A C5 1 HETATM 486 C C6 . DM5 E 2 . ? 36.938 23.866 8.399 1.00 3.41 ? 25 DM5 A C6 1 HETATM 487 O O6 . DM5 E 2 . ? 36.991 25.151 8.365 1.00 2.45 ? 25 DM5 A O6 1 HETATM 488 C C7 . DM5 E 2 . ? 36.859 23.177 9.622 1.00 2.58 ? 25 DM5 A C7 1 HETATM 489 C C8 . DM5 E 2 . ? 36.700 23.912 10.812 1.00 3.02 ? 25 DM5 A C8 1 HETATM 490 O O8 . DM5 E 2 . ? 36.541 25.197 10.812 1.00 3.79 ? 25 DM5 A O8 1 HETATM 491 C C9 . DM5 E 2 . ? 36.726 23.223 12.036 1.00 5.68 ? 25 DM5 A C9 1 HETATM 492 C C10 . DM5 E 2 . ? 36.700 24.095 13.325 1.00 8.82 ? 25 DM5 A C10 1 HETATM 493 O O10 . DM5 E 2 . ? 35.401 24.784 13.193 1.00 12.85 ? 25 DM5 A O10 1 HETATM 494 C C11 . DM5 E 2 . ? 36.859 23.269 14.582 1.00 8.88 ? 25 DM5 A C11 1 HETATM 495 C C12 . DM5 E 2 . ? 36.223 21.892 14.549 1.00 9.35 ? 25 DM5 A C12 1 HETATM 496 O O12 . DM5 E 2 . ? 34.765 21.938 14.516 1.00 11.68 ? 25 DM5 A O12 1 HETATM 497 C C13 . DM5 E 2 . ? 36.567 21.112 15.805 1.00 9.37 ? 25 DM5 A C13 1 HETATM 498 O O13 . DM5 E 2 . ? 37.627 20.378 15.706 1.00 10.53 ? 25 DM5 A O13 1 HETATM 499 C C14 . DM5 E 2 . ? 36.223 21.525 17.227 1.00 11.50 ? 25 DM5 A C14 1 HETATM 500 C C15 . DM5 E 2 . ? 36.832 21.112 13.325 1.00 5.11 ? 25 DM5 A C15 1 HETATM 501 C C16 . DM5 E 2 . ? 36.700 21.892 12.102 1.00 5.16 ? 25 DM5 A C16 1 HETATM 502 C C17 . DM5 E 2 . ? 36.912 21.158 10.945 1.00 3.28 ? 25 DM5 A C17 1 HETATM 503 O O17 . DM5 E 2 . ? 36.965 19.781 11.011 1.00 2.86 ? 25 DM5 A O17 1 HETATM 504 C C18 . DM5 E 2 . ? 36.938 21.755 9.688 1.00 2.75 ? 25 DM5 A C18 1 HETATM 505 C C19 . DM5 E 2 . ? 37.097 21.020 8.465 1.00 3.55 ? 25 DM5 A C19 1 HETATM 506 O O19 . DM5 E 2 . ? 37.150 19.735 8.465 1.00 3.56 ? 25 DM5 A O19 1 HETATM 507 C C20 . DM5 E 2 . ? 37.150 21.755 7.241 1.00 2.62 ? 25 DM5 A C20 1 HETATM 508 C "C1'" . DM5 E 2 . ? 35.030 25.885 13.986 1.00 14.66 ? 25 DM5 A "C1'" 1 HETATM 509 C "C2'" . DM5 E 2 . ? 34.182 26.803 13.061 1.00 15.73 ? 25 DM5 A "C2'" 1 HETATM 510 C "C3'" . DM5 E 2 . ? 32.858 26.161 12.730 1.00 17.51 ? 25 DM5 A "C3'" 1 HETATM 511 N "N3'" . DM5 E 2 . ? 31.983 27.124 11.903 1.00 19.20 ? 25 DM5 A "N3'" 1 HETATM 512 C "C4'" . DM5 E 2 . ? 32.169 26.069 14.119 1.00 17.46 ? 25 DM5 A "C4'" 1 HETATM 513 O "O4'" . DM5 E 2 . ? 31.824 27.216 14.615 1.00 20.04 ? 25 DM5 A "O4'" 1 HETATM 514 C "C5'" . DM5 E 2 . ? 32.937 25.105 15.012 1.00 16.72 ? 25 DM5 A "C5'" 1 HETATM 515 O "O5'" . DM5 E 2 . ? 34.288 25.518 15.177 1.00 17.08 ? 25 DM5 A "O5'" 1 HETATM 516 C "C6'" . DM5 E 2 . ? 32.275 24.876 16.301 1.00 16.59 ? 25 DM5 A "C6'" 1 HETATM 517 N N1 . SPM F 3 . ? 29.413 20.653 2.050 1.00 36.51 ? 29 SPM A N1 1 HETATM 518 C C2 . SPM F 3 . ? 29.704 21.433 0.794 1.00 36.10 ? 29 SPM A C2 1 HETATM 519 C C3 . SPM F 3 . ? 30.102 22.948 1.058 1.00 36.79 ? 29 SPM A C3 1 HETATM 520 C C4 . SPM F 3 . ? 31.533 23.132 1.620 1.00 36.48 ? 29 SPM A C4 1 HETATM 521 N N5 . SPM F 3 . ? 32.142 24.463 1.323 1.00 36.43 ? 29 SPM A N5 1 HETATM 522 C C6 . SPM F 3 . ? 31.506 25.564 2.149 1.00 35.66 ? 29 SPM A C6 1 HETATM 523 C C7 . SPM F 3 . ? 32.354 26.023 3.340 1.00 35.92 ? 29 SPM A C7 1 HETATM 524 C C8 . SPM F 3 . ? 33.520 26.941 2.943 1.00 34.91 ? 29 SPM A C8 1 HETATM 525 C C9 . SPM F 3 . ? 33.520 28.318 3.604 1.00 35.86 ? 29 SPM A C9 1 HETATM 526 N N10 . SPM F 3 . ? 34.315 28.410 4.861 1.00 36.96 ? 29 SPM A N10 1 HETATM 527 C C11 . SPM F 3 . ? 35.057 29.695 5.026 1.00 35.05 ? 29 SPM A C11 1 HETATM 528 C C12 . SPM F 3 . ? 36.382 29.511 5.786 1.00 34.77 ? 29 SPM A C12 1 HETATM 529 C C13 . SPM F 3 . ? 36.938 30.842 6.348 1.00 35.25 ? 29 SPM A C13 1 HETATM 530 N N14 . SPM F 3 . ? 38.263 30.658 7.010 1.00 34.89 ? 29 SPM A N14 1 HETATM 531 C C1 . DM5 G 2 . ? 19.768 19.643 13.854 1.00 4.93 ? 26 DM5 B C1 1 HETATM 532 C C2 . DM5 G 2 . ? 19.582 19.598 15.243 1.00 2.75 ? 26 DM5 B C2 1 HETATM 533 C C3 . DM5 G 2 . ? 19.556 20.745 16.037 1.00 4.02 ? 26 DM5 B C3 1 HETATM 534 C C4 . DM5 G 2 . ? 19.715 22.030 15.441 1.00 2.51 ? 26 DM5 B C4 1 HETATM 535 C C5 . DM5 G 2 . ? 19.926 22.030 14.053 1.00 3.40 ? 26 DM5 B C5 1 HETATM 536 C C6 . DM5 G 2 . ? 20.085 23.315 13.391 1.00 3.28 ? 26 DM5 B C6 1 HETATM 537 O O6 . DM5 G 2 . ? 19.979 24.417 14.020 1.00 5.00 ? 26 DM5 B O6 1 HETATM 538 C C7 . DM5 G 2 . ? 20.271 23.361 11.970 1.00 3.02 ? 26 DM5 B C7 1 HETATM 539 C C8 . DM5 G 2 . ? 20.403 24.600 11.341 1.00 5.28 ? 26 DM5 B C8 1 HETATM 540 O O8 . DM5 G 2 . ? 20.350 25.702 12.069 1.00 5.44 ? 26 DM5 B O8 1 HETATM 541 C C9 . DM5 G 2 . ? 20.377 24.646 9.953 1.00 7.05 ? 26 DM5 B C9 1 HETATM 542 C C10 . DM5 G 2 . ? 20.430 26.023 9.225 1.00 11.21 ? 26 DM5 B C10 1 HETATM 543 O O10 . DM5 G 2 . ? 21.675 26.528 9.787 1.00 14.86 ? 26 DM5 B O10 1 HETATM 544 C C11 . DM5 G 2 . ? 20.456 25.885 7.737 1.00 10.49 ? 26 DM5 B C11 1 HETATM 545 C C12 . DM5 G 2 . ? 21.145 24.692 7.175 1.00 10.87 ? 26 DM5 B C12 1 HETATM 546 O O12 . DM5 G 2 . ? 22.603 24.646 7.539 1.00 12.87 ? 26 DM5 B O12 1 HETATM 547 C C13 . DM5 G 2 . ? 21.225 24.554 5.654 1.00 10.22 ? 26 DM5 B C13 1 HETATM 548 O O13 . DM5 G 2 . ? 20.085 24.049 5.191 1.00 13.87 ? 26 DM5 B O13 1 HETATM 549 C C14 . DM5 G 2 . ? 21.834 25.610 4.695 1.00 13.50 ? 26 DM5 B C14 1 HETATM 550 C C15 . DM5 G 2 . ? 20.456 23.407 7.737 1.00 7.94 ? 26 DM5 B C15 1 HETATM 551 C C16 . DM5 G 2 . ? 20.350 23.499 9.192 1.00 5.76 ? 26 DM5 B C16 1 HETATM 552 C C17 . DM5 G 2 . ? 20.430 22.260 9.853 1.00 3.31 ? 26 DM5 B C17 1 HETATM 553 O O17 . DM5 G 2 . ? 20.244 21.112 9.093 1.00 6.71 ? 26 DM5 B O17 1 HETATM 554 C C18 . DM5 G 2 . ? 20.297 22.122 11.209 1.00 3.04 ? 26 DM5 B C18 1 HETATM 555 C C19 . DM5 G 2 . ? 20.112 20.883 11.870 1.00 2.05 ? 26 DM5 B C19 1 HETATM 556 O O19 . DM5 G 2 . ? 20.059 19.781 11.209 1.00 5.33 ? 26 DM5 B O19 1 HETATM 557 C C20 . DM5 G 2 . ? 19.953 20.883 13.259 1.00 3.20 ? 26 DM5 B C20 1 HETATM 558 C "C1'" . DM5 G 2 . ? 21.993 27.905 9.853 1.00 17.82 ? 26 DM5 B "C1'" 1 HETATM 559 C "C2'" . DM5 G 2 . ? 22.868 28.042 11.110 1.00 18.06 ? 26 DM5 B "C2'" 1 HETATM 560 C "C3'" . DM5 G 2 . ? 24.246 27.400 10.878 1.00 18.91 ? 26 DM5 B "C3'" 1 HETATM 561 N "N3'" . DM5 G 2 . ? 25.226 27.446 12.003 1.00 18.72 ? 26 DM5 B "N3'" 1 HETATM 562 C "C4'" . DM5 G 2 . ? 24.829 28.134 9.688 1.00 20.06 ? 26 DM5 B "C4'" 1 HETATM 563 O "O4'" . DM5 G 2 . ? 25.306 29.327 9.986 1.00 22.36 ? 26 DM5 B "O4'" 1 HETATM 564 C "C5'" . DM5 G 2 . ? 24.007 27.905 8.432 1.00 19.54 ? 26 DM5 B "C5'" 1 HETATM 565 O "O5'" . DM5 G 2 . ? 22.656 28.410 8.630 1.00 19.59 ? 26 DM5 B "O5'" 1 HETATM 566 C "C6'" . DM5 G 2 . ? 24.564 28.410 7.142 1.00 21.78 ? 26 DM5 B "C6'" 1
spin
Assembly
Assembly ID: 198d_1
Assembly defined by
: Author
PDB ID
:
198d
Experimental method
: X-RAY DIFFRACTION
Resolution
: 1.97 Å
UniProt ID
: N/A
PubMed ID
:
7784175
Ligand 1
:
DM5
Ligand 2
:
DM5
Ligand 3
:
SPM
Ligand 4
:
DNA
Download
mmCIF Format
PDB Format
Ligand ID
NUC pairing detail
Ligand Name
Synonyms
Formula
2D structure
DM5
N/A
Idarubicin
1: (1s,3s)-3-acetyl-3,5,12-trihydroxy-6,11-dioxo-1,2,3,4,6,11-hexahydronaphthacen-1-yl 3-amino-2,3,6-trideoxy-alpha-l-lyxo-hexopyranoside; 2: 4-demethoxydaunorubicin; 3: 5,12-naphthacenedione, 9-acetyl-7-((3-amino-2,3,6-trideoxy-alpha-l-lyxo-hexopyranosyl)oxy)-7,8,9,10-tetrahydro-6,9,11-trihydroxy-, (7s-cis)-; 4: (1s,3s)-3-acetyl-3,5,12-trihydroxy-6,11-dioxo-1,2,3,4,6,11-hexahydrotetracen-1-yl 3-amino-2,3,6-trideoxy-alpha-l-lyxo-hexopyranoside; 5: 4-demethoxydaunomycin; 6: 4-demethoxy-daunorubicin;
"C26 H27 N O9"
DM5
N/A
Idarubicin
1: (1s,3s)-3-acetyl-3,5,12-trihydroxy-6,11-dioxo-1,2,3,4,6,11-hexahydronaphthacen-1-yl 3-amino-2,3,6-trideoxy-alpha-l-lyxo-hexopyranoside; 2: 4-demethoxydaunorubicin; 3: 5,12-naphthacenedione, 9-acetyl-7-((3-amino-2,3,6-trideoxy-alpha-l-lyxo-hexopyranosyl)oxy)-7,8,9,10-tetrahydro-6,9,11-trihydroxy-, (7s-cis)-; 4: (1s,3s)-3-acetyl-3,5,12-trihydroxy-6,11-dioxo-1,2,3,4,6,11-hexahydrotetracen-1-yl 3-amino-2,3,6-trideoxy-alpha-l-lyxo-hexopyranoside; 5: 4-demethoxydaunomycin; 6: 4-demethoxy-daunorubicin;
"C26 H27 N O9"
SPM
N/A
Spermine
1: N,n'-bis(3-aminopropyl)butane-1,4-diamine; 2: 4,9-diaza-1,12-dodecanediamine; 3: 4,9-diazadodecane-1,12-diamine; 4: N,n'-bis(3-aminopropyl)-1,4-butanediamine;
"C10 H26 N4"
DNA
A:DNA B:DNA
Deoxyribonucleic acid
N/A
"C11 H8 O4"
N/A
Reference
Wei et al,
Q-BioLiP: A Comprehensive Resource for Quaternary Structure-based Protein–ligand Interactions
,
Genomics, Proteomics & Bioinformatics
, 22(1), qzae001, 2024. (
PDF
)