Q-BioLiP BL2908910

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data_133d_1
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_alt_id
_atom_site.label_comp_id
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.label_seq_id
_atom_site.pdbx_PDB_ins_code
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_seq_id
_atom_site.auth_comp_id
_atom_site.auth_asym_id
_atom_site.auth_atom_id
_atom_site.pdbx_PDB_model_num
HETATM 1   O "O5'" . DC  A 1 1 ? 19.782 17.856 18.365 1.00 8.72  ? 1  DC  A "O5'" 1
HETATM 2   C "C5'" . DC  A 1 1 ? 20.067 16.631 19.068 1.00 2.28  ? 1  DC  A "C5'" 1
HETATM 3   C "C4'" . DC  A 1 1 ? 18.884 15.804 19.296 1.00 10.33 ? 1  DC  A "C4'" 1
HETATM 4   O "O4'" . DC  A 1 1 ? 17.809 16.493 19.878 1.00 9.34  ? 1  DC  A "O4'" 1
HETATM 5   C "C3'" . DC  A 1 1 ? 18.291 14.914 18.249 1.00 6.02  ? 1  DC  A "C3'" 1
HETATM 6   O "O3'" . DC  A 1 1 ? 18.030 13.579 18.705 1.00 8.90  ? 1  DC  A "O3'" 1
HETATM 7   C "C2'" . DC  A 1 1 ? 17.040 15.699 17.846 1.00 2.00  ? 1  DC  A "C2'" 1
HETATM 8   C "C1'" . DC  A 1 1 ? 16.592 16.296 19.139 1.00 14.95 ? 1  DC  A "C1'" 1
HETATM 9   N N1    . DC  A 1 1 ? 15.743 17.496 19.050 1.00 9.59  ? 1  DC  A N1    1
HETATM 10  C C2    . DC  A 1 1 ? 14.370 17.302 19.001 1.00 3.83  ? 1  DC  A C2    1
HETATM 11  O O2    . DC  A 1 1 ? 13.877 16.179 19.050 1.00 4.43  ? 1  DC  A O2    1
HETATM 12  N N3    . DC  A 1 1 ? 13.568 18.391 18.911 1.00 7.66  ? 1  DC  A N3    1
HETATM 13  C C4    . DC  A 1 1 ? 14.062 19.662 18.884 1.00 2.40  ? 1  DC  A C4    1
HETATM 14  N N4    . DC  A 1 1 ? 13.228 20.681 18.817 1.00 2.00  ? 1  DC  A N4    1
HETATM 15  C C5    . DC  A 1 1 ? 15.468 19.862 18.942 1.00 4.58  ? 1  DC  A C5    1
HETATM 16  C C6    . DC  A 1 1 ? 16.252 18.776 19.018 1.00 2.90  ? 1  DC  A C6    1
HETATM 17  P P     . DG  A 1 2 ? 19.082 12.376 18.522 1.00 14.01 ? 2  DG  A P     1
HETATM 18  O OP1   . DG  A 1 2 ? 19.924 12.708 17.344 1.00 19.00 ? 2  DG  A OP1   1
HETATM 19  O OP2   . DG  A 1 2 ? 18.365 11.068 18.392 1.00 10.19 ? 2  DG  A OP2   1
HETATM 20  O "O5'" . DG  A 1 2 ? 19.981 12.416 19.842 1.00 22.16 ? 2  DG  A "O5'" 1
HETATM 21  C "C5'" . DG  A 1 2 ? 19.382 12.213 21.171 1.00 2.11  ? 2  DG  A "C5'" 1
HETATM 22  C "C4'" . DG  A 1 2 ? 20.639 12.462 22.040 1.00 6.95  ? 2  DG  A "C4'" 1
HETATM 23  O "O4'" . DG  A 1 2 ? 20.976 13.782 21.718 1.00 2.00  ? 2  DG  A "O4'" 1
HETATM 24  C "C3'" . DG  A 1 2 ? 20.368 12.323 23.494 1.00 6.38  ? 2  DG  A "C3'" 1
HETATM 25  O "O3'" . DG  A 1 2 ? 20.540 11.120 24.184 1.00 33.82 ? 2  DG  A "O3'" 1
HETATM 26  C "C2'" . DG  A 1 2 ? 20.950 13.542 24.108 1.00 9.41  ? 2  DG  A "C2'" 1
HETATM 27  C "C1'" . DG  A 1 2 ? 21.297 14.465 23.020 1.00 14.46 ? 2  DG  A "C1'" 1
HETATM 28  N N9    . DG  A 1 2 ? 20.556 15.720 22.998 1.00 5.76  ? 2  DG  A N9    1
HETATM 29  C C8    . DG  A 1 2 ? 21.081 17.007 23.051 1.00 2.00  ? 2  DG  A C8    1
HETATM 30  N N7    . DG  A 1 2 ? 20.190 17.942 22.989 1.00 15.78 ? 2  DG  A N7    1
HETATM 31  C C5    . DG  A 1 2 ? 18.982 17.265 22.890 1.00 13.08 ? 2  DG  A C5    1
HETATM 32  C C6    . DG  A 1 2 ? 17.646 17.723 22.787 1.00 9.91  ? 2  DG  A C6    1
HETATM 33  O O6    . DG  A 1 2 ? 17.264 18.896 22.743 1.00 3.46  ? 2  DG  A O6    1
HETATM 34  N N1    . DG  A 1 2 ? 16.703 16.736 22.702 1.00 11.18 ? 2  DG  A N1    1
HETATM 35  C C2    . DG  A 1 2 ? 17.059 15.410 22.716 1.00 8.02  ? 2  DG  A C2    1
HETATM 36  N N2    . DG  A 1 2 ? 16.045 14.520 22.622 1.00 17.96 ? 2  DG  A N2    1
HETATM 37  N N3    . DG  A 1 2 ? 18.282 14.920 22.810 1.00 9.39  ? 2  DG  A N3    1
HETATM 38  C C4    . DG  A 1 2 ? 19.199 15.896 22.895 1.00 15.14 ? 2  DG  A C4    1
HETATM 39  P P     . DC  A 1 3 ? 19.521 10.037 24.721 1.00 56.78 ? 3  DC  A P     1
HETATM 40  O OP1   . DC  A 1 3 ? 20.226 8.809  25.316 1.00 35.26 ? 3  DC  A OP1   1
HETATM 41  O OP2   . DC  A 1 3 ? 18.708 9.628  23.517 1.00 13.77 ? 3  DC  A OP2   1
HETATM 42  O "O5'" . DC  A 1 3 ? 18.660 10.705 25.916 1.00 25.20 ? 3  DC  A "O5'" 1
HETATM 43  C "C5'" . DC  A 1 3 ? 17.588 9.819  26.458 1.00 24.01 ? 3  DC  A "C5'" 1
HETATM 44  C "C4'" . DC  A 1 3 ? 16.401 10.699 26.699 1.00 4.46  ? 3  DC  A "C4'" 1
HETATM 45  O "O4'" . DC  A 1 3 ? 16.793 11.979 27.156 1.00 13.17 ? 3  DC  A "O4'" 1
HETATM 46  C "C3'" . DC  A 1 3 ? 15.466 10.899 25.540 1.00 2.00  ? 3  DC  A "C3'" 1
HETATM 47  O "O3'" . DC  A 1 3 ? 14.113 10.616 25.912 1.00 17.42 ? 3  DC  A "O3'" 1
HETATM 48  C "C2'" . DC  A 1 3 ? 15.652 12.388 25.218 1.00 6.76  ? 3  DC  A "C2'" 1
HETATM 49  C "C1'" . DC  A 1 3 ? 15.912 12.969 26.569 1.00 5.24  ? 3  DC  A "C1'" 1
HETATM 50  N N1    . DC  A 1 3 ? 16.536 14.305 26.476 1.00 6.00  ? 3  DC  A N1    1
HETATM 51  C C2    . DC  A 1 3 ? 15.675 15.376 26.359 1.00 7.89  ? 3  DC  A C2    1
HETATM 52  O O2    . DC  A 1 3 ? 14.431 15.237 26.314 1.00 7.32  ? 3  DC  A O2    1
HETATM 53  N N3    . DC  A 1 3 ? 16.218 16.640 26.279 1.00 2.00  ? 3  DC  A N3    1
HETATM 54  C C4    . DC  A 1 3 ? 17.545 16.837 26.301 1.00 6.35  ? 3  DC  A C4    1
HETATM 55  N N4    . DC  A 1 3 ? 17.993 18.090 26.225 1.00 3.91  ? 3  DC  A N4    1
HETATM 56  C C5    . DC  A 1 3 ? 18.431 15.717 26.435 1.00 7.79  ? 3  DC  A C5    1
HETATM 57  C C6    . DC  A 1 3 ? 17.868 14.511 26.498 1.00 2.82  ? 3  DC  A C6    1
HETATM 58  P P     . DG  A 1 4 ? 13.681 9.099  26.225 1.00 31.84 ? 4  DG  A P     1
HETATM 59  O OP1   . DG  A 1 4 ? 14.186 8.262  25.097 1.00 30.25 ? 4  DG  A OP1   1
HETATM 60  O OP2   . DG  A 1 4 ? 12.160 9.090  26.292 1.00 18.93 ? 4  DG  A OP2   1
HETATM 61  O "O5'" . DG  A 1 4 ? 14.416 8.693  27.536 1.00 39.21 ? 4  DG  A "O5'" 1
HETATM 62  C "C5'" . DG  A 1 4 ? 14.114 8.991  28.893 1.00 16.38 ? 4  DG  A "C5'" 1
HETATM 63  C "C4'" . DG  A 1 4 ? 14.977 7.939  29.636 1.00 20.57 ? 4  DG  A "C4'" 1
HETATM 64  O "O4'" . DG  A 1 4 ? 16.317 8.062  29.197 1.00 4.65  ? 4  DG  A "O4'" 1
HETATM 65  C "C3'" . DG  A 1 4 ? 14.918 8.108  31.126 1.00 20.28 ? 4  DG  A "C3'" 1
HETATM 66  O "O3'" . DG  A 1 4 ? 14.030 7.228  31.762 1.00 37.82 ? 4  DG  A "O3'" 1
HETATM 67  C "C2'" . DG  A 1 4 ? 16.353 8.016  31.583 1.00 16.94 ? 4  DG  A "C2'" 1
HETATM 68  C "C1'" . DG  A 1 4 ? 17.184 8.126  30.343 1.00 5.58  ? 4  DG  A "C1'" 1
HETATM 69  N N9    . DG  A 1 4 ? 17.886 9.425  30.361 1.00 9.19  ? 4  DG  A N9    1
HETATM 70  C C8    . DG  A 1 4 ? 19.248 9.634  30.401 1.00 2.00  ? 4  DG  A C8    1
HETATM 71  N N7    . DG  A 1 4 ? 19.573 10.896 30.410 1.00 2.00  ? 4  DG  A N7    1
HETATM 72  C C5    . DG  A 1 4 ? 18.365 11.560 30.352 1.00 2.29  ? 4  DG  A C5    1
HETATM 73  C C6    . DG  A 1 4 ? 18.057 12.960 30.343 1.00 4.97  ? 4  DG  A C6    1
HETATM 74  O O6    . DG  A 1 4 ? 18.872 13.890 30.370 1.00 10.50 ? 4  DG  A O6    1
HETATM 75  N N1    . DG  A 1 4 ? 16.723 13.250 30.285 1.00 11.20 ? 4  DG  A N1    1
HETATM 76  C C2    . DG  A 1 4 ? 15.754 12.274 30.258 1.00 7.25  ? 4  DG  A C2    1
HETATM 77  N N2    . DG  A 1 4 ? 14.510 12.754 30.200 1.00 3.41  ? 4  DG  A N2    1
HETATM 78  N N3    . DG  A 1 4 ? 15.979 10.945 30.285 1.00 3.49  ? 4  DG  A N3    1
HETATM 79  C C4    . DG  A 1 4 ? 17.306 10.674 30.325 1.00 4.85  ? 4  DG  A C4    1
HETATM 80  P P     . DC  A 1 5 ? 12.525 7.431  32.191 1.00 53.00 ? 5  DC  A P     1
HETATM 81  O OP1   . DC  A 1 5 ? 12.295 6.219  33.060 1.00 44.35 ? 5  DC  A OP1   1
HETATM 82  O OP2   . DC  A 1 5 ? 11.549 7.474  31.037 1.00 32.38 ? 5  DC  A OP2   1
HETATM 83  O "O5'" . DC  A 1 5 ? 12.465 8.822  32.975 1.00 19.48 ? 5  DC  A "O5'" 1
HETATM 84  C "C5'" . DC  A 1 5 ? 11.518 8.969  34.067 1.00 7.10  ? 5  DC  A "C5'" 1
HETATM 85  C "C4'" . DC  A 1 5 ? 11.396 10.474 34.282 1.00 2.00  ? 5  DC  A "C4'" 1
HETATM 86  O "O4'" . DC  A 1 5 ? 12.617 10.926 34.823 1.00 2.30  ? 5  DC  A "O4'" 1
HETATM 87  C "C1'" . DC  A 1 5 ? 12.946 12.231 34.255 1.00 18.12 ? 5  DC  A "C1'" 1
HETATM 88  N N1    . DC  A 1 5 ? 14.429 12.268 34.139 1.00 4.08  ? 5  DC  A N1    1
HETATM 89  C C6    . DC  A 1 5 ? 15.179 11.136 34.165 1.00 2.00  ? 5  DC  A C6    1
HETATM 90  C C2    . DC  A 1 5 ? 15.013 13.530 33.982 1.00 8.00  ? 5  DC  A C2    1
HETATM 91  O O2    . DC  A 1 5 ? 14.314 14.539 33.959 1.00 10.42 ? 5  DC  A O2    1
HETATM 92  N N3    . DC  A 1 5 ? 16.360 13.597 33.856 1.00 2.00  ? 5  DC  A N3    1
HETATM 93  C C4    . DC  A 1 5 ? 17.137 12.471 33.897 1.00 4.95  ? 5  DC  A C4    1
HETATM 94  N N4    . DC  A 1 5 ? 18.464 12.588 33.771 1.00 2.87  ? 5  DC  A N4    1
HETATM 95  C C7    . DC  A 1 5 ? 19.365 11.434 33.942 1.00 2.00  ? 5  DC  A C7    1
HETATM 96  C C5    . DC  A 1 5 ? 16.520 11.191 34.053 1.00 3.03  ? 5  DC  A C5    1
HETATM 97  C "C2'" . DC  A 1 5 ? 12.455 11.985 32.764 1.00 2.00  ? 5  DC  A "C2'" 1
HETATM 98  C "C3'" . DC  A 1 5 ? 11.121 11.302 33.069 1.00 9.31  ? 5  DC  A "C3'" 1
HETATM 99  O "O3'" . DC  A 1 5 ? 10.180 12.385 33.288 1.00 12.37 ? 5  DC  A "O3'" 1
HETATM 100 P P     . DG  A 1 6 ? 8.652  12.093 33.700 1.00 25.65 ? 6  DG  A P     1
HETATM 101 O OP1   . DG  A 1 6 ? 8.104  11.173 32.706 1.00 10.52 ? 6  DG  A OP1   1
HETATM 102 O OP2   . DG  A 1 6 ? 8.007  13.453 33.785 1.00 18.53 ? 6  DG  A OP2   1
HETATM 103 O "O5'" . DG  A 1 6 ? 8.844  11.403 35.123 1.00 35.32 ? 6  DG  A "O5'" 1
HETATM 104 C "C5'" . DG  A 1 6 ? 8.154  11.757 36.345 1.00 25.04 ? 6  DG  A "C5'" 1
HETATM 105 C "C4'" . DG  A 1 6 ? 7.517  10.450 36.766 1.00 11.83 ? 6  DG  A "C4'" 1
HETATM 106 O "O4'" . DG  A 1 6 ? 8.416  9.379  36.582 1.00 29.12 ? 6  DG  A "O4'" 1
HETATM 107 C "C3'" . DG  A 1 6 ? 7.041  10.357 38.212 1.00 33.41 ? 6  DG  A "C3'" 1
HETATM 108 O "O3'" . DG  A 1 6 ? 5.926  9.440  38.404 1.00 18.39 ? 6  DG  A "O3'" 1
HETATM 109 C "C2'" . DG  A 1 6 ? 8.316  9.828  38.905 1.00 23.51 ? 6  DG  A "C2'" 1
HETATM 110 C "C1'" . DG  A 1 6 ? 8.834  8.865  37.876 1.00 17.27 ? 6  DG  A "C1'" 1
HETATM 111 N N9    . DG  A 1 6 ? 10.304 8.785  37.943 1.00 3.45  ? 6  DG  A N9    1
HETATM 112 C C8    . DG  A 1 6 ? 11.045 7.609  38.037 1.00 2.00  ? 6  DG  A C8    1
HETATM 113 N N7    . DG  A 1 6 ? 12.318 7.828  38.055 1.00 2.00  ? 6  DG  A N7    1
HETATM 114 C C5    . DG  A 1 6 ? 12.437 9.234  37.952 1.00 5.14  ? 6  DG  A C5    1
HETATM 115 C C6    . DG  A 1 6 ? 13.577 10.068 37.921 1.00 2.00  ? 6  DG  A C6    1
HETATM 116 O O6    . DG  A 1 6 ? 14.753 9.797  37.974 1.00 2.00  ? 6  DG  A O6    1
HETATM 117 N N1    . DG  A 1 6 ? 13.285 11.413 37.822 1.00 8.69  ? 6  DG  A N1    1
HETATM 118 C C2    . DG  A 1 6 ? 12.002 11.889 37.751 1.00 2.37  ? 6  DG  A C2    1
HETATM 119 N N2    . DG  A 1 6 ? 12.000 13.225 37.652 1.00 2.00  ? 6  DG  A N2    1
HETATM 120 N N3    . DG  A 1 6 ? 10.916 11.136 37.773 1.00 9.08  ? 6  DG  A N3    1
HETATM 121 C C4    . DG  A 1 6 ? 11.194 9.822  37.867 1.00 3.38  ? 6  DG  A C4    1
HETATM 122 O "O5'" . DC  B 1 1 ? 19.449 20.154 36.815 1.00 9.59  ? 7  DC  B "O5'" 1
HETATM 123 C "C5'" . DC  B 1 1 ? 19.035 18.850 37.294 1.00 2.66  ? 7  DC  B "C5'" 1
HETATM 124 C "C4'" . DC  B 1 1 ? 17.611 18.665 36.779 1.00 3.57  ? 7  DC  B "C4'" 1
HETATM 125 O "O4'" . DC  B 1 1 ? 17.433 17.364 36.309 1.00 11.48 ? 7  DC  B "O4'" 1
HETATM 126 C "C3'" . DC  B 1 1 ? 16.536 18.899 37.773 1.00 2.00  ? 7  DC  B "C3'" 1
HETATM 127 O "O3'" . DC  B 1 1 ? 15.418 19.613 37.249 1.00 10.44 ? 7  DC  B "O3'" 1
HETATM 128 C "C2'" . DC  B 1 1 ? 16.069 17.483 38.145 1.00 2.00  ? 7  DC  B "C2'" 1
HETATM 129 C "C1'" . DC  B 1 1 ? 16.223 16.764 36.815 1.00 2.00  ? 7  DC  B "C1'" 1
HETATM 130 N N1    . DC  B 1 1 ? 16.567 15.333 36.999 1.00 6.11  ? 7  DC  B N1    1
HETATM 131 C C2    . DC  B 1 1 ? 15.540 14.459 37.334 1.00 6.99  ? 7  DC  B C2    1
HETATM 132 O O2    . DC  B 1 1 ? 14.388 14.856 37.482 1.00 11.56 ? 7  DC  B O2    1
HETATM 133 N N3    . DC  B 1 1 ? 15.866 13.145 37.486 1.00 2.54  ? 7  DC  B N3    1
HETATM 134 C C4    . DC  B 1 1 ? 17.113 12.683 37.321 1.00 2.00  ? 7  DC  B C4    1
HETATM 135 N N4    . DC  B 1 1 ? 17.379 11.394 37.486 1.00 2.18  ? 7  DC  B N4    1
HETATM 136 C C5    . DC  B 1 1 ? 18.165 13.594 36.967 1.00 3.86  ? 7  DC  B C5    1
HETATM 137 C C6    . DC  B 1 1 ? 17.841 14.880 36.820 1.00 10.02 ? 7  DC  B C6    1
HETATM 138 P P     . DG  B 1 2 ? 15.082 21.114 37.482 1.00 19.47 ? 8  DG  B P     1
HETATM 139 O OP1   . DG  B 1 2 ? 15.668 21.687 38.744 1.00 33.89 ? 8  DG  B OP1   1
HETATM 140 O OP2   . DG  B 1 2 ? 13.625 21.216 37.375 1.00 21.77 ? 8  DG  B OP2   1
HETATM 141 O "O5'" . DG  B 1 2 ? 15.889 21.859 36.233 1.00 11.75 ? 8  DG  B "O5'" 1
HETATM 142 C "C5'" . DG  B 1 2 ? 15.430 21.277 34.913 1.00 12.79 ? 8  DG  B "C5'" 1
HETATM 143 C "C4'" . DG  B 1 2 ? 16.423 21.881 33.906 1.00 8.07  ? 8  DG  B "C4'" 1
HETATM 144 O "O4'" . DG  B 1 2 ? 17.673 21.290 34.228 1.00 8.35  ? 8  DG  B "O4'" 1
HETATM 145 C "C3'" . DG  B 1 2 ? 16.125 21.628 32.456 1.00 21.08 ? 8  DG  B "C3'" 1
HETATM 146 O "O3'" . DG  B 1 2 ? 15.461 22.607 31.708 1.00 24.61 ? 8  DG  B "O3'" 1
HETATM 147 C "C2'" . DG  B 1 2 ? 17.491 21.277 31.865 1.00 4.44  ? 8  DG  B "C2'" 1
HETATM 148 C "C1'" . DG  B 1 2 ? 18.365 20.945 33.006 1.00 7.81  ? 8  DG  B "C1'" 1
HETATM 149 N N9    . DG  B 1 2 ? 18.866 19.573 33.078 1.00 3.48  ? 8  DG  B N9    1
HETATM 150 C C8    . DG  B 1 2 ? 20.177 19.176 33.087 1.00 2.00  ? 8  DG  B C8    1
HETATM 151 N N7    . DG  B 1 2 ? 20.332 17.880 33.181 1.00 4.83  ? 8  DG  B N7    1
HETATM 152 C C5    . DG  B 1 2 ? 19.053 17.373 33.266 1.00 4.33  ? 8  DG  B C5    1
HETATM 153 C C6    . DG  B 1 2 ? 18.550 16.053 33.395 1.00 2.80  ? 8  DG  B C6    1
HETATM 154 O O6    . DG  B 1 2 ? 19.219 15.007 33.449 1.00 12.36 ? 8  DG  B O6    1
HETATM 155 N N1    . DG  B 1 2 ? 17.187 15.939 33.463 1.00 8.21  ? 8  DG  B N1    1
HETATM 156 C C2    . DG  B 1 2 ? 16.378 17.059 33.404 1.00 8.45  ? 8  DG  B C2    1
HETATM 157 N N2    . DG  B 1 2 ? 15.053 16.850 33.480 1.00 2.00  ? 8  DG  B N2    1
HETATM 158 N N3    . DG  B 1 2 ? 16.797 18.320 33.279 1.00 8.54  ? 8  DG  B N3    1
HETATM 159 C C4    . DG  B 1 2 ? 18.129 18.413 33.216 1.00 9.14  ? 8  DG  B C4    1
HETATM 160 P P     . DC  B 1 3 ? 13.992 22.813 31.180 1.00 34.74 ? 9  DC  B P     1
HETATM 161 O OP1   . DC  B 1 3 ? 13.872 24.068 30.338 1.00 33.96 ? 9  DC  B OP1   1
HETATM 162 O OP2   . DC  B 1 3 ? 13.136 22.967 32.429 1.00 9.64  ? 9  DC  B OP2   1
HETATM 163 O "O5'" . DC  B 1 3 ? 13.541 21.564 30.325 1.00 15.30 ? 9  DC  B "O5'" 1
HETATM 164 C "C5'" . DC  B 1 3 ? 12.446 21.699 29.340 1.00 8.71  ? 9  DC  B "C5'" 1
HETATM 165 C "C4'" . DC  B 1 3 ? 12.095 20.213 29.134 1.00 4.30  ? 9  DC  B "C4'" 1
HETATM 166 O "O4'" . DC  B 1 3 ? 13.228 19.490 28.700 1.00 11.40 ? 9  DC  B "O4'" 1
HETATM 167 C "C3'" . DC  B 1 3 ? 11.687 19.545 30.437 1.00 8.55  ? 9  DC  B "C3'" 1
HETATM 168 O "O3'" . DC  B 1 3 ? 10.655 18.539 30.208 1.00 11.67 ? 9  DC  B "O3'" 1
HETATM 169 C "C2'" . DC  B 1 3 ? 13.017 18.865 30.853 1.00 2.70  ? 9  DC  B "C2'" 1
HETATM 170 C "C1'" . DC  B 1 3 ? 13.392 18.259 29.465 1.00 3.22  ? 9  DC  B "C1'" 1
HETATM 171 N N1    . DC  B 1 3 ? 14.825 17.865 29.577 1.00 2.00  ? 9  DC  B N1    1
HETATM 172 C C2    . DC  B 1 3 ? 15.067 16.514 29.797 1.00 19.31 ? 9  DC  B C2    1
HETATM 173 O O2    . DC  B 1 3 ? 14.132 15.696 29.882 1.00 17.35 ? 9  DC  B O2    1
HETATM 174 N N3    . DC  B 1 3 ? 16.371 16.111 29.900 1.00 2.42  ? 9  DC  B N3    1
HETATM 175 C C4    . DC  B 1 3 ? 17.394 16.994 29.806 1.00 6.35  ? 9  DC  B C4    1
HETATM 176 N N4    . DC  B 1 3 ? 18.643 16.524 29.927 1.00 3.96  ? 9  DC  B N4    1
HETATM 177 C C5    . DC  B 1 3 ? 17.126 18.382 29.591 1.00 2.00  ? 9  DC  B C5    1
HETATM 178 C C6    . DC  B 1 3 ? 15.846 18.748 29.488 1.00 7.10  ? 9  DC  B C6    1
HETATM 179 P P     . DG  B 1 4 ? 9.168  19.268 30.168 1.00 34.56 ? 10 DG  B P     1
HETATM 180 O OP1   . DG  B 1 4 ? 9.096  20.117 31.431 1.00 27.67 ? 10 DG  B OP1   1
HETATM 181 O OP2   . DG  B 1 4 ? 8.265  18.133 30.097 1.00 18.33 ? 10 DG  B OP2   1
HETATM 182 O "O5'" . DG  B 1 4 ? 9.260  20.244 28.906 1.00 23.25 ? 10 DG  B "O5'" 1
HETATM 183 C "C5'" . DG  B 1 4 ? 8.825  19.733 27.604 1.00 28.90 ? 10 DG  B "C5'" 1
HETATM 184 C "C4'" . DG  B 1 4 ? 8.857  20.862 26.610 1.00 25.91 ? 10 DG  B "C4'" 1
HETATM 185 O "O4'" . DG  B 1 4 ? 9.902  21.767 26.829 1.00 9.45  ? 10 DG  B "O4'" 1
HETATM 186 C "C3'" . DG  B 1 4 ? 8.880  20.437 25.151 1.00 18.20 ? 10 DG  B "C3'" 1
HETATM 187 O "O3'" . DG  B 1 4 ? 7.613  20.314 24.546 1.00 19.32 ? 10 DG  B "O3'" 1
HETATM 188 C "C2'" . DG  B 1 4 ? 9.945  21.259 24.502 1.00 8.19  ? 10 DG  B "C2'" 1
HETATM 189 C "C1'" . DG  B 1 4 ? 10.572 22.080 25.589 1.00 6.88  ? 10 DG  B "C1'" 1
HETATM 190 N N9    . DG  B 1 4 ? 12.018 21.905 25.688 1.00 4.03  ? 10 DG  B N9    1
HETATM 191 C C8    . DG  B 1 4 ? 12.951 22.908 25.719 1.00 2.23  ? 10 DG  B C8    1
HETATM 192 N N7    . DG  B 1 4 ? 14.195 22.487 25.818 1.00 5.10  ? 10 DG  B N7    1
HETATM 193 C C5    . DG  B 1 4 ? 14.064 21.090 25.836 1.00 6.96  ? 10 DG  B C5    1
HETATM 194 C C6    . DG  B 1 4 ? 15.042 20.074 25.925 1.00 3.93  ? 10 DG  B C6    1
HETATM 195 O O6    . DG  B 1 4 ? 16.277 20.173 25.992 1.00 16.22 ? 10 DG  B O6    1
HETATM 196 N N1    . DG  B 1 4 ? 14.540 18.791 25.920 1.00 4.49  ? 10 DG  B N1    1
HETATM 197 C C2    . DG  B 1 4 ? 13.217 18.542 25.844 1.00 4.04  ? 10 DG  B C2    1
HETATM 198 N N2    . DG  B 1 4 ? 12.906 17.256 25.876 1.00 7.31  ? 10 DG  B N2    1
HETATM 199 N N3    . DG  B 1 4 ? 12.241 19.484 25.755 1.00 8.79  ? 10 DG  B N3    1
HETATM 200 C C4    . DG  B 1 4 ? 12.742 20.721 25.755 1.00 2.61  ? 10 DG  B C4    1
HETATM 201 P P     . DC  B 1 5 ? 7.061  18.834 24.148 1.00 32.15 ? 11 DC  B P     1
HETATM 202 O OP1   . DC  B 1 5 ? 5.572  18.810 24.018 1.00 38.03 ? 11 DC  B OP1   1
HETATM 203 O OP2   . DC  B 1 5 ? 7.501  18.040 25.325 1.00 29.59 ? 11 DC  B OP2   1
HETATM 204 O "O5'" . DC  B 1 5 ? 7.794  18.616 22.734 1.00 18.83 ? 11 DC  B "O5'" 1
HETATM 205 C "C5'" . DC  B 1 5 ? 7.478  17.576 21.803 1.00 15.51 ? 11 DC  B "C5'" 1
HETATM 206 C "C4'" . DC  B 1 5 ? 8.564  16.560 21.726 1.00 2.00  ? 11 DC  B "C4'" 1
HETATM 207 O "O4'" . DC  B 1 5 ? 9.806  17.053 21.274 1.00 20.13 ? 11 DC  B "O4'" 1
HETATM 208 C "C1'" . DC  B 1 5 ? 10.885 16.597 22.138 1.00 5.31  ? 11 DC  B "C1'" 1
HETATM 209 N N1    . DC  B 1 5 ? 11.942 17.600 22.232 1.00 3.42  ? 11 DC  B N1    1
HETATM 210 C C6    . DC  B 1 5 ? 11.709 18.948 22.219 1.00 2.00  ? 11 DC  B C6    1
HETATM 211 C C2    . DC  B 1 5 ? 13.255 17.124 22.326 1.00 7.07  ? 11 DC  B C2    1
HETATM 212 O O2    . DC  B 1 5 ? 13.510 15.908 22.335 1.00 2.00  ? 11 DC  B O2    1
HETATM 213 N N3    . DC  B 1 5 ? 14.244 18.034 22.411 1.00 2.00  ? 11 DC  B N3    1
HETATM 214 C C4    . DC  B 1 5 ? 14.033 19.357 22.380 1.00 2.00  ? 11 DC  B C4    1
HETATM 215 N N4    . DC  B 1 5 ? 15.058 20.219 22.465 1.00 2.00  ? 11 DC  B N4    1
HETATM 216 C C7    . DC  B 1 5 ? 14.866 21.668 22.214 1.00 5.22  ? 11 DC  B C7    1
HETATM 217 C C5    . DC  B 1 5 ? 12.681 19.859 22.281 1.00 2.00  ? 11 DC  B C5    1
HETATM 218 C "C2'" . DC  B 1 5 ? 10.209 16.243 23.427 1.00 2.00  ? 11 DC  B "C2'" 1
HETATM 219 C "C3'" . DC  B 1 5 ? 8.864  15.659 22.872 1.00 2.00  ? 11 DC  B "C3'" 1
HETATM 220 O "O3'" . DC  B 1 5 ? 8.961  14.311 22.447 1.00 12.92 ? 11 DC  B "O3'" 1
HETATM 221 P P     . DG  B 1 6 ? 7.580  13.425 22.514 1.00 18.33 ? 12 DG  B P     1
HETATM 222 O OP1   . DG  B 1 6 ? 6.910  13.505 23.848 1.00 24.36 ? 12 DG  B OP1   1
HETATM 223 O OP2   . DG  B 1 6 ? 8.102  12.071 22.197 1.00 23.13 ? 12 DG  B OP2   1
HETATM 224 O "O5'" . DG  B 1 6 ? 6.671  14.133 21.431 1.00 9.05  ? 12 DG  B "O5'" 1
HETATM 225 C "C5'" . DG  B 1 6 ? 6.715  13.502 20.079 1.00 2.00  ? 12 DG  B "C5'" 1
HETATM 226 C "C4'" . DG  B 1 6 ? 5.412  14.117 19.538 1.00 2.00  ? 12 DG  B "C4'" 1
HETATM 227 O "O4'" . DG  B 1 6 ? 5.639  15.536 19.663 1.00 3.63  ? 12 DG  B "O4'" 1
HETATM 228 C "C3'" . DG  B 1 6 ? 5.268  13.887 18.016 1.00 13.33 ? 12 DG  B "C3'" 1
HETATM 229 O "O3'" . DG  B 1 6 ? 3.986  14.336 17.573 1.00 33.73 ? 12 DG  B "O3'" 1
HETATM 230 C "C2'" . DG  B 1 6 ? 6.430  14.828 17.577 1.00 2.77  ? 12 DG  B "C2'" 1
HETATM 231 C "C1'" . DG  B 1 6 ? 6.056  16.025 18.387 1.00 11.68 ? 12 DG  B "C1'" 1
HETATM 232 N N9    . DG  B 1 6 ? 7.037  17.087 18.387 1.00 2.00  ? 12 DG  B N9    1
HETATM 233 C C8    . DG  B 1 6 ? 6.689  18.434 18.414 1.00 9.32  ? 12 DG  B C8    1
HETATM 234 N N7    . DG  B 1 6 ? 7.726  19.240 18.414 1.00 4.36  ? 12 DG  B N7    1
HETATM 235 C C5    . DG  B 1 6 ? 8.805  18.397 18.383 1.00 3.20  ? 12 DG  B C5    1
HETATM 236 C C6    . DG  B 1 6 ? 10.198 18.650 18.356 1.00 2.79  ? 12 DG  B C6    1
HETATM 237 O O6    . DG  B 1 6 ? 10.727 19.779 18.369 1.00 7.30  ? 12 DG  B O6    1
HETATM 238 N N1    . DG  B 1 6 ? 11.016 17.542 18.334 1.00 4.35  ? 12 DG  B N1    1
HETATM 239 C C2    . DG  B 1 6 ? 10.450 16.277 18.334 1.00 5.72  ? 12 DG  B C2    1
HETATM 240 N N2    . DG  B 1 6 ? 11.308 15.247 18.289 1.00 4.13  ? 12 DG  B N2    1
HETATM 241 N N3    . DG  B 1 6 ? 9.146  15.960 18.356 1.00 5.79  ? 12 DG  B N3    1
HETATM 242 C C4    . DG  B 1 6 ? 8.384  17.062 18.378 1.00 2.74  ? 12 DG  B C4    1

spin

Assembly

Assembly ID: 133d_1

Assembly defined by: Author

PDB ID: 133d

Experimental method: X-RAY DIFFRACTION

Resolution: 1.8 Å

UniProt ID: N/A

PubMed ID: 8284207

Ligand 1 : DNA

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mmCIF Format

PDB Format

Ligand ID	NUC pairing detail	Ligand Name	Synonyms	Formula	2D structure
DNA	B:DNA A:DNA	Deoxyribonucleic acid	N/A	"C11 H8 O4"	N/A

Reference

Wei et al, Q-BioLiP: A Comprehensive Resource for Quaternary Structure-based Protein–ligand Interactions, Genomics, Proteomics & Bioinformatics, 22(1), qzae001, 2024. (PDF)

Function Annotation for BL2908910

Assembly

Assembly ID: 133d_1

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