Home
Browse
Browse biologically relevant interactions
Browse biologically irrelevant interactions
Browse structures with ligands or proteins only
Search
Ligand
Q-SITE
Download
Statistics
Help
Yang Lab
Function Annotation for BL2864702
3D View
More Information
data_1a7y_3 # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_alt_id _atom_site.label_comp_id _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.label_seq_id _atom_site.pdbx_PDB_ins_code _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_seq_id _atom_site.auth_comp_id _atom_site.auth_asym_id _atom_site.auth_atom_id _atom_site.pdbx_PDB_model_num HETATM 181 N N . THR C 1 1 ? 22.739 16.168 2.542 1.00 2.88 ? 1 THR C N 1 HETATM 182 C CA . THR C 1 1 ? 23.144 14.783 2.602 1.00 2.81 ? 1 THR C CA 1 HETATM 183 C C . THR C 1 1 ? 21.924 13.870 2.711 1.00 2.56 ? 1 THR C C 1 HETATM 184 O O . THR C 1 1 ? 20.880 14.235 3.251 1.00 3.15 ? 1 THR C O 1 HETATM 185 C CB . THR C 1 1 ? 24.053 14.456 3.813 1.00 3.43 ? 1 THR C CB 1 HETATM 186 O OG1 . THR C 1 1 ? 23.244 14.552 5.012 1.00 3.34 ? 1 THR C OG1 1 HETATM 187 C CG2 . THR C 1 1 ? 25.255 15.362 3.941 1.00 4.51 ? 1 THR C CG2 1 HETATM 188 N N . DVA C 1 2 ? 22.152 12.620 2.293 1.00 2.62 ? 2 DVA C N 1 HETATM 189 C CA . DVA C 1 2 ? 21.321 11.463 2.676 1.00 2.64 ? 2 DVA C CA 1 HETATM 190 C CB . DVA C 1 2 ? 22.150 10.190 2.466 1.00 3.00 ? 2 DVA C CB 1 HETATM 191 C CG1 . DVA C 1 2 ? 23.467 10.281 3.249 1.00 4.33 ? 2 DVA C CG1 1 HETATM 192 C CG2 . DVA C 1 2 ? 21.366 8.954 2.892 1.00 4.00 ? 2 DVA C CG2 1 HETATM 193 C C . DVA C 1 2 ? 20.028 11.429 1.850 1.00 2.45 ? 2 DVA C C 1 HETATM 194 O O . DVA C 1 2 ? 20.077 11.267 0.617 1.00 2.88 ? 2 DVA C O 1 HETATM 195 N N . PRO C 1 3 ? 18.847 11.528 2.479 1.00 2.66 ? 3 PRO C N 1 HETATM 196 C CA . PRO C 1 3 ? 18.605 11.980 3.848 1.00 2.93 ? 3 PRO C CA 1 HETATM 197 C C . PRO C 1 3 ? 18.796 10.845 4.876 1.00 2.66 ? 3 PRO C C 1 HETATM 198 O O . PRO C 1 3 ? 18.711 9.683 4.531 1.00 3.15 ? 3 PRO C O 1 HETATM 199 C CB . PRO C 1 3 ? 17.140 12.427 3.822 1.00 3.35 ? 3 PRO C CB 1 HETATM 200 C CG . PRO C 1 3 ? 16.518 11.504 2.779 1.00 3.12 ? 3 PRO C CG 1 HETATM 201 C CD . PRO C 1 3 ? 17.596 11.396 1.726 1.00 3.16 ? 3 PRO C CD 1 HETATM 202 N N . SAR C 1 4 ? 18.967 11.218 6.168 1.00 3.47 ? 4 SAR C N 1 HETATM 203 C CA . SAR C 1 4 ? 19.342 12.556 6.593 1.00 3.91 ? 4 SAR C CA 1 HETATM 204 C C . SAR C 1 4 ? 20.859 12.761 6.535 1.00 3.43 ? 4 SAR C C 1 HETATM 205 O O . SAR C 1 4 ? 21.597 11.896 6.075 1.00 3.46 ? 4 SAR C O 1 HETATM 206 C CN . SAR C 1 4 ? 19.176 10.151 7.167 1.00 4.26 ? 4 SAR C CN 1 HETATM 207 N N . MVA C 1 5 ? 21.355 13.900 7.074 1.00 3.81 ? 5 MVA C N 1 HETATM 208 C CN . MVA C 1 5 ? 20.483 14.934 7.631 1.00 6.52 ? 5 MVA C CN 1 HETATM 209 C CA . MVA C 1 5 ? 22.808 13.966 7.291 1.00 3.77 ? 5 MVA C CA 1 HETATM 210 C CB . MVA C 1 5 ? 23.291 13.040 8.445 1.00 4.41 ? 5 MVA C CB 1 HETATM 211 C CG1 . MVA C 1 5 ? 24.703 13.390 8.877 1.00 5.40 ? 5 MVA C CG1 1 HETATM 212 C CG2 . MVA C 1 5 ? 22.345 13.098 9.637 1.00 6.52 ? 5 MVA C CG2 1 HETATM 213 C C . MVA C 1 5 ? 23.615 13.721 6.035 1.00 3.63 ? 5 MVA C C 1 HETATM 214 O O . MVA C 1 5 ? 24.525 12.942 5.928 1.00 4.33 ? 5 MVA C O 1 HETATM 215 C C1 . PXZ C 1 6 ? 23.087 18.504 1.912 1.00 3.06 ? 6 PXZ C C1 1 HETATM 216 C C . PXZ C 1 6 ? 23.481 17.062 1.842 1.00 3.00 ? 6 PXZ C C 1 HETATM 217 O O . PXZ C 1 6 ? 24.525 16.726 1.289 1.00 3.99 ? 6 PXZ C O 1 HETATM 218 C C2 . PXZ C 1 6 ? 24.092 19.452 1.746 1.00 3.20 ? 6 PXZ C C2 1 HETATM 219 N N2 . PXZ C 1 6 ? 25.343 19.211 1.400 1.00 5.00 ? 6 PXZ C N2 1 HETATM 220 C C3 . PXZ C 1 6 ? 23.771 20.910 1.914 1.00 3.52 ? 6 PXZ C C3 1 HETATM 221 O O3 . PXZ C 1 6 ? 24.663 21.723 1.693 1.00 6.38 ? 6 PXZ C O3 1 HETATM 222 C C4 . PXZ C 1 6 ? 22.444 21.323 2.272 1.00 3.32 ? 6 PXZ C C4 1 HETATM 223 O O5 . PXZ C 1 6 ? 20.230 20.752 2.747 1.00 3.73 ? 6 PXZ C O5 1 HETATM 224 C C6 . PXZ C 1 6 ? 17.946 20.299 3.142 1.00 3.98 ? 6 PXZ C C6 1 HETATM 225 C C7 . PXZ C 1 6 ? 16.921 19.359 3.137 1.00 4.01 ? 6 PXZ C C7 1 HETATM 226 C C8 . PXZ C 1 6 ? 17.134 18.027 2.764 1.00 3.96 ? 6 PXZ C C8 1 HETATM 227 C C9 . PXZ C 1 6 ? 18.387 17.595 2.379 1.00 3.32 ? 6 PXZ C C9 1 HETATM 228 C "C'" . PXZ C 1 6 ? 18.506 16.176 1.836 1.00 3.28 ? 6 PXZ C "C'" 1 HETATM 229 O "O'" . PXZ C 1 6 ? 17.775 15.287 2.275 1.00 4.02 ? 6 PXZ C "O'" 1 HETATM 230 N N10 . PXZ C 1 6 ? 20.752 18.053 2.184 1.00 2.98 ? 6 PXZ C N10 1 HETATM 231 C C11 . PXZ C 1 6 ? 21.754 18.942 2.174 1.00 2.98 ? 6 PXZ C C11 1 HETATM 232 C C12 . PXZ C 1 6 ? 21.500 20.365 2.397 1.00 3.06 ? 6 PXZ C C12 1 HETATM 233 C C13 . PXZ C 1 6 ? 19.204 19.838 2.781 1.00 2.99 ? 6 PXZ C C13 1 HETATM 234 C C14 . PXZ C 1 6 ? 19.478 18.503 2.440 1.00 3.07 ? 6 PXZ C C14 1 HETATM 235 C C15 . PXZ C 1 6 ? 22.152 22.781 2.458 1.00 4.32 ? 6 PXZ C C15 1 HETATM 236 C C16 . PXZ C 1 6 ? 17.737 21.746 3.524 1.00 4.73 ? 6 PXZ C C16 1 HETATM 237 N N . THR C 1 7 ? 19.351 16.018 0.806 1.00 2.98 ? 7 THR C N 1 HETATM 238 C CA . THR C 1 7 ? 19.503 14.766 0.118 1.00 3.06 ? 7 THR C CA 1 HETATM 239 C C . THR C 1 7 ? 20.940 14.689 -0.445 1.00 2.63 ? 7 THR C C 1 HETATM 240 O O . THR C 1 7 ? 21.591 15.706 -0.677 1.00 3.14 ? 7 THR C O 1 HETATM 241 C CB . THR C 1 7 ? 18.545 14.619 -1.062 1.00 3.69 ? 7 THR C CB 1 HETATM 242 O OG1 . THR C 1 7 ? 18.912 15.694 -1.975 1.00 3.78 ? 7 THR C OG1 1 HETATM 243 C CG2 . THR C 1 7 ? 17.072 14.758 -0.691 1.00 5.08 ? 7 THR C CG2 1 HETATM 244 N N . DVA C 1 8 ? 21.358 13.440 -0.729 1.00 2.59 ? 8 DVA C N 1 HETATM 245 C CA . DVA C 1 8 ? 22.471 13.138 -1.609 1.00 2.58 ? 8 DVA C CA 1 HETATM 246 C CB . DVA C 1 8 ? 22.270 11.759 -2.233 1.00 2.89 ? 8 DVA C CB 1 HETATM 247 C CG1 . DVA C 1 8 ? 23.336 11.448 -3.282 1.00 4.15 ? 8 DVA C CG1 1 HETATM 248 C CG2 . DVA C 1 8 ? 20.871 11.616 -2.841 1.00 3.83 ? 8 DVA C CG2 1 HETATM 249 C C . DVA C 1 8 ? 23.813 13.187 -0.825 1.00 2.89 ? 8 DVA C C 1 HETATM 250 O O . DVA C 1 8 ? 24.039 12.356 0.071 1.00 3.19 ? 8 DVA C O 1 HETATM 251 N N . PRO C 1 9 ? 24.713 14.126 -1.148 1.00 3.23 ? 9 PRO C N 1 HETATM 252 C CA . PRO C 1 9 ? 24.484 15.294 -2.040 1.00 3.24 ? 9 PRO C CA 1 HETATM 253 C C . PRO C 1 9 ? 24.494 14.877 -3.491 1.00 3.45 ? 9 PRO C C 1 HETATM 254 O O . PRO C 1 9 ? 25.221 13.962 -3.872 1.00 3.96 ? 9 PRO C O 1 HETATM 255 C CB . PRO C 1 9 ? 25.716 16.186 -1.718 1.00 4.57 ? 9 PRO C CB 1 HETATM 256 C CG . PRO C 1 9 ? 26.794 15.186 -1.333 1.00 5.05 ? 9 PRO C CG 1 HETATM 257 C CD . PRO C 1 9 ? 26.043 14.158 -0.526 1.00 3.99 ? 9 PRO C CD 1 HETATM 258 N N . SAR C 1 10 ? 23.707 15.564 -4.369 1.00 3.74 ? 10 SAR C N 1 HETATM 259 C CA . SAR C 1 10 ? 22.800 16.624 -4.009 1.00 4.37 ? 10 SAR C CA 1 HETATM 260 C C . SAR C 1 10 ? 21.329 16.192 -4.017 1.00 3.61 ? 10 SAR C C 1 HETATM 261 O O . SAR C 1 10 ? 21.023 15.040 -4.297 1.00 3.92 ? 10 SAR C O 1 HETATM 262 C CN . SAR C 1 10 ? 23.689 15.132 -5.764 1.00 4.67 ? 10 SAR C CN 1 HETATM 263 N N . MVA C 1 11 ? 20.389 17.145 -3.801 1.00 4.39 ? 11 MVA C N 1 HETATM 264 C CN . MVA C 1 11 ? 20.721 18.457 -3.256 1.00 7.51 ? 11 MVA C CN 1 HETATM 265 C CA . MVA C 1 11 ? 18.996 16.787 -4.054 1.00 4.86 ? 11 MVA C CA 1 HETATM 266 C CB . MVA C 1 11 ? 18.642 16.730 -5.546 1.00 6.59 ? 11 MVA C CB 1 HETATM 267 C CG1 . MVA C 1 11 ? 17.112 16.673 -5.718 1.00 9.34 ? 11 MVA C CG1 1 HETATM 268 C CG2 . MVA C 1 11 ? 19.207 17.811 -6.314 1.00 14.22 ? 11 MVA C CG2 1 HETATM 269 C C . MVA C 1 11 ? 18.605 15.534 -3.284 1.00 4.21 ? 11 MVA C C 1 HETATM 270 O O . MVA C 1 11 ? 18.011 14.578 -3.710 1.00 5.79 ? 11 MVA C O 1 HETATM 295 C C1 . EEE H 2 . ? 23.522 17.796 6.992 1.00 6.65 ? 101 EEE C C1 1 HETATM 296 C C2 . EEE H 2 . ? 22.602 18.343 5.975 1.00 10.63 ? 101 EEE C C2 1 HETATM 297 O O1 . EEE H 2 . ? 23.206 17.307 8.037 1.00 7.85 ? 101 EEE C O1 1 HETATM 298 O O2 . EEE H 2 . ? 24.794 17.916 6.594 1.00 6.71 ? 101 EEE C O2 1 HETATM 299 C C3 . EEE H 2 . ? 25.803 17.391 7.524 1.00 7.66 ? 101 EEE C C3 1 HETATM 300 C C4 . EEE H 2 . ? 27.103 17.608 6.928 1.00 9.09 ? 101 EEE C C4 1 HETATM 301 C C1 . EEE I 2 . ? 15.904 9.674 -4.892 1.00 9.88 ? 102 EEE C C1 1 HETATM 302 C C2 . EEE I 2 . ? 15.053 8.519 -5.237 1.00 9.40 ? 102 EEE C C2 1 HETATM 303 O O1 . EEE I 2 . ? 16.214 10.564 -5.630 1.00 12.27 ? 102 EEE C O1 1 HETATM 304 O O2 . EEE I 2 . ? 16.433 9.511 -3.670 1.00 10.52 ? 102 EEE C O2 1 HETATM 305 C C3 . EEE I 2 . ? 17.284 10.576 -3.135 1.00 13.47 ? 102 EEE C C3 1 HETATM 306 C C4 . EEE I 2 . ? 17.176 10.630 -1.719 1.00 9.07 ? 102 EEE C C4 1 HETATM 307 C C1 . EEE J 2 . ? 13.887 12.380 -3.836 1.00 17.64 ? 103 EEE C C1 1 HETATM 308 C C2 . EEE J 2 . ? 14.829 13.484 -3.810 1.00 26.05 ? 103 EEE C C2 1 HETATM 309 O O1 . EEE J 2 . ? 13.732 11.352 -3.230 1.00 19.51 ? 103 EEE C O1 1 HETATM 310 O O2 . EEE J 2 . ? 13.022 12.694 -4.773 1.00 13.37 ? 103 EEE C O2 1 HETATM 311 C C3 . EEE J 2 . ? 11.972 11.726 -4.957 1.00 12.83 ? 103 EEE C C3 1 HETATM 312 C C4 . EEE J 2 . ? 11.138 12.060 -5.990 1.00 10.42 ? 103 EEE C C4 1 HETATM 313 C C . MOH K 3 . ? 17.622 15.596 5.262 1.00 28.23 ? 108 MOH C C 1 HETATM 314 O O . MOH K 3 . ? 18.932 15.402 4.944 1.00 10.03 ? 108 MOH C O 1
spin
Assembly
Assembly ID: 1a7y_3
Assembly defined by
: Author
PDB ID
:
1a7y
Experimental method
: X-RAY DIFFRACTION
Resolution
: 0.94 Å
UniProt ID
: N/A
PubMed ID
:
29710967
Ligand 1
:
EEE
Ligand 2
:
EEE
Ligand 3
:
EEE
Ligand 4
:
MOH
Ligand 5
:
III
Download
mmCIF Format
PDB Format
Ligand ID
NUC pairing detail
Ligand Name
Synonyms
Formula
2D structure
EEE
N/A
Ethyl acetate
1: Essigsaeureethylester; 2: Ethylazetat; 3: Etoac; 4: 1-acetoxyethane; 5: Acetic ester; 6: Acetic acid, ethyl ester; 7: Ethyl ethanoate; 8: Vinegar naphtha; 9: Ethylacetat; 10: Acoet; 11: Acetoxyethane; 12: Ethyl acetic ester; 13: Essigester; 14: Acetic acid ethyl ester; 15: Ch3-co-o-ch3; 16: Acetyl ester;
"C4 H8 O2"
EEE
N/A
Ethyl acetate
1: Essigsaeureethylester; 2: Ethylazetat; 3: Etoac; 4: 1-acetoxyethane; 5: Acetic ester; 6: Acetic acid, ethyl ester; 7: Ethyl ethanoate; 8: Vinegar naphtha; 9: Ethylacetat; 10: Acoet; 11: Acetoxyethane; 12: Ethyl acetic ester; 13: Essigester; 14: Acetic acid ethyl ester; 15: Ch3-co-o-ch3; 16: Acetyl ester;
"C4 H8 O2"
EEE
N/A
Ethyl acetate
1: Essigsaeureethylester; 2: Ethylazetat; 3: Etoac; 4: 1-acetoxyethane; 5: Acetic ester; 6: Acetic acid, ethyl ester; 7: Ethyl ethanoate; 8: Vinegar naphtha; 9: Ethylacetat; 10: Acoet; 11: Acetoxyethane; 12: Ethyl acetic ester; 13: Essigester; 14: Acetic acid ethyl ester; 15: Ch3-co-o-ch3; 16: Acetyl ester;
"C4 H8 O2"
MOH
N/A
Methanol
1: Ch3oh; 2: Carbinol; 3: Wood naphtha; 4: Meoh; 5: Methylalkohol; 6: Wood alcohol; 7: Wood spirit; 8: Methyl alcohol; 9: Spirit of wood;
"C H4 O"
III
N/A
Peptide
N/A
"C14 H18 N4"
N/A
Reference
Wei et al,
Q-BioLiP: A Comprehensive Resource for Quaternary Structure-based Protein–ligand Interactions
,
Genomics, Proteomics & Bioinformatics
, 22(1), qzae001, 2024. (
PDF
)