Function Annotation for BL9817




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Receptor

Assembly ID: 1f40_1

Stoichiometry type: Monomer -A1
Assembly defined by: Author
PDB ID: 1f40
Experimental method: SOLUTION NMR
Resolution: N/A
UniProt ID: P62942
PubMed ID: 10951192

Ligand

Ligand ID: GPI
Ligand name: (2s)-[3-pyridyl-1-propyl]-1-[3,3-dimethyl-1,2-dioxopentyl]-2-pyrrolidinecarboxylate
Biological relevance: Relevant

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Ligand ID Name SynonymsFormula 2D structure
GPI (2s)-[3-pyridyl-1-propyl]-1-[3,3-dimethyl-1,2-dioxopentyl]-2-pyrrolidinecarboxylate "C20 H28 N2 O4" N/A


Binding affinity

Experimental affinity Ki=0.010000 nm, from BindingDB
Kd=1uM, from PDBbind-CN
Predicted affinity 0.29 mM, show detail

Surface area (A2)

Surface area of receptor 5984.98
Surface area of ligand 573.39
Surface area of complex 5962.03
Interface area 298.17
Reference

  • Wei et al, Q-BioLiP: A Comprehensive Resource for Quaternary Structure-based Protein–ligand Interactions, Genomics, Proteomics & Bioinformatics, 22(1), qzae001, 2024. (PDF)