Function Annotation for BL9273



                                                                                          Spin

Receptor

Assembly ID: 1exd_1

Stoichiometry type: Monomer -A1
Assembly defined by: Author
PDB ID: 1exd
Experimental method: X-RAY DIFFRACTION
Resolution: 2.7 Å
UniProt ID: P00962
PubMed ID: 10881199

Ligand

Ligand ID: RNA
Ligand name: Ribonucleic acid
Biological relevance: Relevant

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Ligand ID NUC pairing details Name
RNA A:RNA Ribonucleic acid


Binding affinity

Experimental affinity Kd=7.1nM, from PDBbind-CN

Surface area (A2)

Surface area of receptor 23629.4
Surface area of ligand 12467.23
Surface area of complex 30832.74
Interface area 2631.95

Reference

  • Wei et al, Q-BioLiP: A Comprehensive Resource for Quaternary Structure-based Protein–ligand InteractionsGenomics, Proteomics & Bioinformatics, 22(1), qzae001, 2024. (PDF)