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Yang Lab
Function Annotation for BL82727
3D View
Ligand Information
Binding Information
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Binding residues
Residue numbering in mmCIF file:
C2:
L56 T57 K68
C23:
L56 T57 K68
Residue numbering in PDB file:
C2:
L56 T57 K68
C23:
L56 T57 K68
Receptor
Assembly ID: 3lob_6
Stoichiometry type
: Homo 180-mer -A180
Assembly defined by
: crystal asymmetric unit
PDB ID
:
3lob
Experimental method
: X-RAY DIFFRACTION
Resolution
: 3.6 Å
Other biological units from the same PDB ID
: 3lob_1,3lob_2,3lob_3,3lob_4,3lob_5
UniProt ID
:
P12870
PubMed ID
:
20164221
Ligand
Ligand ID
:
RNA
Ligand name
: Ribonucleic acid
Biological relevance
: Relevant
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mmCIF Format
Receptor
Ligand
PDB Format
Receptor
Ligand
Ligand ID
NUC pairing details
Name
RNA
G2:RNA G23:RNA
Ribonucleic acid
Binding affinity
Experimental affinity
N/A
Surface area
Surface area of receptor(A
2
)
N/A
Surface area of ligand(A
2
)
N/A
Surface area of complex(A
2
)
N/A
Interface area(A
2
)
N/A
Reference
Wei et al,
Q-BioLiP: A Comprehensive Resource for Quaternary Structure-based Protein–ligand Interactions
,
Genomics, Proteomics & Bioinformatics
, 22(1), qzae001, 2024. (
PDF
)