Function Annotation for BL7998




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Receptor

Assembly ID: 1d4p_1

Stoichiometry type: Monomer -A1
Assembly defined by: Author
PDB ID: 1d4p
Experimental method: X-RAY DIFFRACTION
Resolution: 2.07 Å
UniProt ID: P01050 P00734
PubMed ID: 9232642

Ligand

Ligand ID: BPP
Ligand name: (4-benzyl-piperidin-1-yl)-(5-amidinomethyl-3ah-indol-2-yl-methanone
Biological relevance: Relevant

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Ligand ID Name SynonymsFormula 2D structure
BPP (4-benzyl-piperidin-1-yl)-(5-amidinomethyl-3ah-indol-2-yl-methanone "C22 H24 N4 O" N/A


Binding affinity

Experimental affinity Ka=2000000M^-1, from BindingMOAD
Kd=0.5uM, from PDBbind-CN
Predicted affinity N/A, show detail

Surface area (A2)

Surface area of receptor 12112.38
Surface area of ligand 591.23
Surface area of complex 11878.23
Interface area 412.69
Reference

  • Wei et al, Q-BioLiP: A Comprehensive Resource for Quaternary Structure-based Protein–ligand Interactions, Genomics, Proteomics & Bioinformatics, 22(1), qzae001, 2024. (PDF)