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Yang Lab
Function Annotation for BL64373
3D View
Ligand Information
Binding Information
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Binding residues
Residue numbering in mmCIF file:
C20:
K8 K10 E74 P132 N134
Residue numbering in PDB file:
C20:
K8 K10 E74 P132 N134
Receptor
Assembly ID: 2xpj_1
Stoichiometry type
: Hetero 180-mer -A179B1
Assembly defined by
: complete icosahedral assembly
PDB ID
:
2xpj
Experimental method
: X-RAY DIFFRACTION
Resolution
: 3.4 Å
Other biological units from the same PDB ID
: 2xpj_2,2xpj_3,2xpj_4,2xpj_5
UniProt ID
:
P36351
PubMed ID
: N/A
Ligand
Ligand ID
:
RNA
Ligand name
: Ribonucleic acid
Biological relevance
: Relevant
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mmCIF Format
Receptor
Ligand
PDB Format
Receptor
Ligand
Ligand ID
NUC pairing details
Name
RNA
D20:RNA
Ribonucleic acid
Binding affinity
Experimental affinity
N/A
Surface area
Surface area of receptor(A
2
)
N/A
Surface area of ligand(A
2
)
894.75
Surface area of complex(A
2
)
894.75
Interface area(A
2
)
N/A
Reference
Wei et al,
Q-BioLiP: A Comprehensive Resource for Quaternary Structure-based Protein–ligand Interactions
,
Genomics, Proteomics & Bioinformatics
, 22(1), qzae001, 2024. (
PDF
)