Home
Browse
Browse biologically relevant interactions
Browse biologically irrelevant interactions
Browse structures with ligands or proteins only
Search
Ligand
Q-SITE
Download
Statistics
Help
News
Yang Lab
Function Annotation for BL63796
3D View
Ligand Information
Binding Information
The structure is too big. Click
here
to show 3D view, it may take a long time or fail, depending on the status of the server.
Binding residues
Residue numbering in mmCIF file:
A8:
R143 M149 E151 K155 V219 D224 C225 A226 S287 S290 S291 V292 R312 N315 R317 R408
B8:
R143 M149 E151 K155 V219 D224 C225 A226 S287 S290 S291 V292 R312 N315 R317 R408
C8:
R143 M149 E151 K155 V219 D224 C225 A226 S287 S290 S291 V292 R312 N315 R317 R408
D8:
R143 M149 E151 K155 V219 D224 C225 A226 S287 S290 S291 V292 R312 N315 R317 R408
E8:
R143 M149 E151 K155 V219 D224 C225 A226 S287 S290 S291 V292 R312 N315 R317 R408
F9:
R143 M149 E151 K155 V219 D224 C225 A226 S287 S290 S291 V292 R312 N315 R317 R408
G9:
R143 M149 E151 K155 V219 D224 C225 A226 S287 S290 S291 V292 R312 N315 R317 R408
H9:
R143 M149 E151 K155 V219 D224 C225 A226 S287 S290 S291 V292 R312 N315 R317 R408
I9:
R143 M149 E151 K155 V219 D224 C225 A226 S287 S290 S291 V292 R312 N315 R317 R408
J9:
R143 M149 E151 K155 V219 D224 C225 A226 S287 S290 S291 V292 R312 N315 R317 R408
Residue numbering in PDB file:
A8:
R143 M149 E151 K155 V219 D224 C225 A226 S287 S290 S291 V292 R312 N315 R317 R408
C8:
R143 M149 E151 K155 V219 D224 C225 A226 S287 S290 S291 V292 R312 N315 R317 R408
D8:
R143 M149 E151 K155 V219 D224 C225 A226 S287 S290 S291 V292 R312 N315 R317 R408
F8:
R143 M149 E151 K155 V219 D224 C225 A226 S287 S290 S291 V292 R312 N315 R317 R408
H8:
R143 M149 E151 K155 V219 D224 C225 A226 S287 S290 S291 V292 R312 N315 R317 R408
I9:
R143 M149 E151 K155 V219 D224 C225 A226 S287 S290 S291 V292 R312 N315 R317 R408
J9:
R143 M149 E151 K155 V219 D224 C225 A226 S287 S290 S291 V292 R312 N315 R317 R408
K9:
R143 M149 E151 K155 V219 D224 C225 A226 S287 S290 S291 V292 R312 N315 R317 R408
L9:
R143 M149 E151 K155 V219 D224 C225 A226 S287 S290 S291 V292 R312 N315 R317 R408
M9:
R143 M149 E151 K155 V219 D224 C225 A226 S287 S290 S291 V292 R312 N315 R317 R408
Receptor
Assembly ID: 2wyy_1
Stoichiometry type
: Homo 150-mer -A150
Assembly defined by
: representative helical assembly
PDB ID
:
2wyy
Experimental method
: ELECTRON MICROSCOPY
Resolution
: 10.6 Å
Other biological units from the same PDB ID
: 2wyy_2,2wyy_3
UniProt ID
:
P03521
PubMed ID
:
20133572
Ligand
Ligand ID
:
RNA
Ligand name
: Ribonucleic acid
Biological relevance
: Relevant
Download
mmCIF Format
Receptor
Ligand
PDB Format
Receptor
Ligand
Ligand ID
NUC pairing details
Name
RNA
K8:RNA
Ribonucleic acid
Binding affinity
Experimental affinity
N/A
Surface area
Surface area of receptor(A
2
)
N/A
Surface area of ligand(A
2
)
11008.29
Surface area of complex(A
2
)
11008.29
Interface area(A
2
)
N/A
Reference
Wei et al,
Q-BioLiP: A Comprehensive Resource for Quaternary Structure-based Protein–ligand Interactions
,
Genomics, Proteomics & Bioinformatics
, 22(1), qzae001, 2024. (
PDF
)