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Yang Lab
Function Annotation for BL63776
3D View
Ligand Information
Binding Information
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Binding residues
Residue numbering in mmCIF file:
A10:
R143 M149 E151 K155 V219 D224 C225 A226 S287 S290 S291 V292 R312 N315 R317 R408
B10:
R143 M149 E151 K155 V219 D224 C225 A226 S287 S290 S291 V292 R312 N315 R317 R408
C10:
R143 M149 E151 K155 V219 D224 C225 A226 S287 S290 S291 V292 R312 N315 R317 R408
D10:
R143 M149 E151 K155 V219 D224 C225 A226 S287 S290 S291 V292 R312 N315 R317 R408
E10:
R143 M149 E151 K155 V219 D224 C225 A226 S287 S290 S291 V292 R312 N315 R317 R408
F11:
R143 M149 E151 K155 V219 D224 C225 A226 S287 S290 S291 V292 R312 N315 R317 R408
G11:
R143 M149 E151 K155 V219 D224 C225 A226 S287 S290 S291 V292 R312 N315 R317 R408
H11:
R143 M149 E151 K155 V219 D224 C225 A226 S287 S290 S291 V292 R312 N315 R317 R408
I11:
R143 M149 E151 K155 V219 D224 C225 A226 S287 S290 S291 V292 R312 N315 R317 R408
J11:
R143 M149 E151 K155 V219 D224 C225 A226 S287 S290 S291 V292 R312 N315 R317 R408
Residue numbering in PDB file:
A10:
R143 M149 E151 K155 V219 D224 C225 A226 S287 S290 S291 V292 R312 N315 R317 R408
C10:
R143 M149 E151 K155 V219 D224 C225 A226 S287 S290 S291 V292 R312 N315 R317 R408
D10:
R143 M149 E151 K155 V219 D224 C225 A226 S287 S290 S291 V292 R312 N315 R317 R408
F10:
R143 M149 E151 K155 V219 D224 C225 A226 S287 S290 S291 V292 R312 N315 R317 R408
H10:
R143 M149 E151 K155 V219 D224 C225 A226 S287 S290 S291 V292 R312 N315 R317 R408
I11:
R143 M149 E151 K155 V219 D224 C225 A226 S287 S290 S291 V292 R312 N315 R317 R408
J11:
R143 M149 E151 K155 V219 D224 C225 A226 S287 S290 S291 V292 R312 N315 R317 R408
K11:
R143 M149 E151 K155 V219 D224 C225 A226 S287 S290 S291 V292 R312 N315 R317 R408
L11:
R143 M149 E151 K155 V219 D224 C225 A226 S287 S290 S291 V292 R312 N315 R317 R408
M11:
R143 M149 E151 K155 V219 D224 C225 A226 S287 S290 S291 V292 R312 N315 R317 R408
Receptor
Assembly ID: 2wyy_1
Stoichiometry type
: Homo 150-mer -A150
Assembly defined by
: representative helical assembly
PDB ID
:
2wyy
Experimental method
: ELECTRON MICROSCOPY
Resolution
: 10.6 Å
Other biological units from the same PDB ID
: 2wyy_2,2wyy_3
UniProt ID
:
P03521
PubMed ID
:
20133572
Ligand
Ligand ID
:
RNA
Ligand name
: Ribonucleic acid
Biological relevance
: Relevant
Download
mmCIF Format
Receptor
Ligand
PDB Format
Receptor
Ligand
Ligand ID
NUC pairing details
Name
RNA
L11:RNA
Ribonucleic acid
Binding affinity
Experimental affinity
N/A
Surface area
Surface area of receptor(A
2
)
N/A
Surface area of ligand(A
2
)
11008.41
Surface area of complex(A
2
)
11008.41
Interface area(A
2
)
N/A
Reference
Wei et al,
Q-BioLiP: A Comprehensive Resource for Quaternary Structure-based Protein–ligand Interactions
,
Genomics, Proteomics & Bioinformatics
, 22(1), qzae001, 2024. (
PDF
)