Home
Browse
Browse biologically relevant interactions
Browse biologically irrelevant interactions
Browse structures with ligands or proteins only
Search
Ligand
Q-SITE
Download
Statistics
Help
News
Yang Lab
Function Annotation for BL56734
3D View
Ligand Information
Binding Information
The structure is too big. Click
here
to show 3D view, it may take a long time or fail, depending on the status of the server.
Binding residues
Residue numbering in mmCIF file:
F10:
R57 R65
F24:
K49 R57 R65
Residue numbering in PDB file:
F10:
R613 R621
F24:
K605 R613 R621
Receptor
Assembly ID: 2qqp_1
Stoichiometry type
: Hetero 480-mer -A238B238C2D2
Assembly defined by
: complete icosahedral assembly
PDB ID
:
2qqp
Experimental method
: X-RAY DIFFRACTION
Resolution
: 3.8 Å
Other biological units from the same PDB ID
: 2qqp_2,2qqp_3,2qqp_4,2qqp_5,2qqp_6
UniProt ID
:
Q80IX5
PubMed ID
:
20541507
12642108
Ligand
Ligand ID
:
RNA
Ligand name
: Ribonucleic acid
Biological relevance
: Relevant
Download
mmCIF Format
Receptor
Ligand
PDB Format
Receptor
Ligand
Ligand ID
NUC pairing details
Name
RNA
I24:RNA
Ribonucleic acid
Binding affinity
Experimental affinity
N/A
Surface area
Surface area of receptor(A
2
)
N/A
Surface area of ligand(A
2
)
N/A
Surface area of complex(A
2
)
N/A
Interface area(A
2
)
N/A
Reference
Wei et al,
Q-BioLiP: A Comprehensive Resource for Quaternary Structure-based Protein–ligand Interactions
,
Genomics, Proteomics & Bioinformatics
, 22(1), qzae001, 2024. (
PDF
)