Function Annotation for BL56047




                                                                                          Spin

Receptor

Assembly ID: 2p1e_1

Stoichiometry type: Monomer -A1
Assembly defined by: Author
PDB ID: 2p1e
Experimental method: X-RAY DIFFRACTION
Resolution: 1.9 Å
UniProt ID: Q2PYN0
PubMed ID: 18052346

Ligand

Ligand ID: SPD
Ligand name: Spermidine
Biological relevance: Relevant

Download

  

Ligand ID Name SynonymsFormula 2D structure
SPD Spermidine "C7 H19 N3" N/A


Binding affinity

Experimental affinity N/A
Predicted affinity 1.8 mM, show detail

Surface area (A2)

Surface area of receptor 11080.49
Surface area of ligand 346.34
Surface area of complex 11047.69
Interface area 189.57
Reference

  • Wei et al, Q-BioLiP: A Comprehensive Resource for Quaternary Structure-based Protein–ligand Interactions, Genomics, Proteomics & Bioinformatics, 22(1), qzae001, 2024. (PDF)