Function Annotation for BL55230




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Receptor

Assembly ID: 2kp8_1

Stoichiometry type: Homo 3-mer -A3
Assembly defined by: Author
PDB ID: 2kp8
Experimental method: SOLUTION NMR
Resolution: N/A
UniProt ID: N/A
PubMed ID: 20004576

Ligand

Ligand ID: XIG
Ligand name: 5-{[(4'-methoxybiphenyl-4-yl)methyl][(1s)-1,2,3,4-tetrahydronaphthalen-1-yl]carbamoyl}benzene-1,2,4-tricarboxylic acid
Biological relevance: Relevant

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Ligand ID Name SynonymsFormula 2D structure
XIG 5-{[(4'-methoxybiphenyl-4-yl)methyl][(1s)-1,2,3,4-tetrahydronaphthalen-1-yl]carbamoyl}benzene-1,2,4-tricarboxylic acid "C34 H29 N O8" N/A


Binding affinity

Experimental affinity Kd=100uM, from PDBbind-CN
Predicted affinity 0.14 uM, show detail

Surface area (A2)

Surface area of receptor 10972.02
Surface area of ligand 799.34
Surface area of complex 11019.45
Interface area 375.95
Reference

  • Wei et al, Q-BioLiP: A Comprehensive Resource for Quaternary Structure-based Protein–ligand Interactions, Genomics, Proteomics & Bioinformatics, 22(1), qzae001, 2024. (PDF)