Function Annotation for BL55154



                                                                                          Spin

Receptor

Assembly ID: 2kdz_1

Stoichiometry type: Monomer -A1
Assembly defined by: Author
PDB ID: 2kdz
Experimental method: SOLUTION NMR
Resolution: N/A
UniProt ID: Q58HP2
PubMed ID: 19246540

Ligand

Ligand ID: DNA
Ligand name: Deoxyribonucleic acid
Biological relevance: Relevant

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Ligand ID NUC pairing details Name
DNA B:DNA C:DNA Deoxyribonucleic acid


Binding affinity

Experimental affinity Kd=1.24nM, from PDBbind-CN

Surface area (A2)

Surface area of receptor 8966.31
Surface area of ligand 5762.81
Surface area of complex 12392.04
Interface area 1168.54

Reference

  • Wei et al, Q-BioLiP: A Comprehensive Resource for Quaternary Structure-based Protein–ligand Interactions, Genomics, Proteomics & Bioinformatics, 22(1), qzae001, 2024. (PDF)