Function Annotation for BL55148




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Receptor

Assembly ID: 2kdh_1

Stoichiometry type: Monomer -A1
Assembly defined by: Author
PDB ID: 2kdh
Experimental method: SOLUTION NMR
Resolution: N/A
UniProt ID: P63316
PubMed ID: 19542563

Ligand

Ligand ID: KDH
Ligand name: (-)-epigallocatechin 3-gallate
Biological relevance: Relevant

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Ligand ID Name SynonymsFormula 2D structure
KDH (-)-epigallocatechin 3-gallate "C22 H18 O11" N/A


Binding affinity

Experimental affinity Kd=1.1mM, from PDBbind-CN
Predicted affinity 59.7 uM, show detail

Surface area (A2)

Surface area of receptor 5411.8
Surface area of ligand 625.19
Surface area of complex 5405.69
Interface area 315.65
Reference

  • Wei et al, Q-BioLiP: A Comprehensive Resource for Quaternary Structure-based Protein–ligand Interactions, Genomics, Proteomics & Bioinformatics, 22(1), qzae001, 2024. (PDF)