Function Annotation for BL55001



                                                                                          Spin

Receptor

Assembly ID: 2jpp_1

Stoichiometry type: Homo 2-mer -A2
Assembly defined by: Author
PDB ID: 2jpp
Experimental method: SOLUTION NMR
Resolution: N/A
UniProt ID: P0DPC3
PubMed ID: 17704818

Ligand

Ligand ID: RNA
Ligand name: Ribonucleic acid
Biological relevance: Relevant

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Ligand ID NUC pairing details Name
RNA A:RNA Ribonucleic acid


Binding affinity

Experimental affinity Kd=85nM, from PDBbind-CN

Surface area (A2)

Surface area of receptor 6481.07
Surface area of ligand 4114.52
Surface area of complex 8693.76
Interface area 950.91

Reference

  • Wei et al, Q-BioLiP: A Comprehensive Resource for Quaternary Structure-based Protein–ligand Interactions, Genomics, Proteomics & Bioinformatics, 22(1), qzae001, 2024. (PDF)