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Yang Lab
Function Annotation for BL5234
3D View
Ligand Information
Binding Information
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Binding residues
Residue number in mmCIF file:
B5:
Y302
C22:
S10 D11 R12 L14 Q15 N30
C41:
A6
D4:
A90 S96 L100 G101 E102 I103 L104 N105 Y106 Y107 T108 H109 W110 A111 Y176 R177 T179 F220 S221 V222 R223 H230
D5:
P81 C84 S133 Y134 A135 P136 P141 P142 K143 K144 A148 T152 V168 G187 G188 Y189 I190 S191 F193
E21:
G1 A2 Q3 V4 S5 S6
E22:
K57 D58 V59 L60 I61 P65 M66 L67
Residue number in PDB file:
15:
Y302
222:
S10 D11 R12 L14 Q15 N30
241:
A6
34:
A90 S96 L100 G101 E102 I103 L104 N105 Y106 Y107 T108 H109 W110 A111 Y176 R177 T179 F220 S221 V222 R223 H230
35:
P81 C84 S133 Y134 A135 P136 P141 P142 K143 K144 A148 T152 V168 G187 G188 Y189 I190 S191 F193
421:
G2 A3 Q4 V5 S6 S7
422:
K58 D59 V60 L61 I62 P66 M67 L68
Receptor
Assembly ID: 1ar7_6
Stoichiometry type
: Hetero 120-mer -A30B30C30D30
Assembly defined by
: crystal asymmetric unit
PDB ID
:
1ar7
Experimental method
: X-RAY DIFFRACTION
Resolution
: 2.9 Å
Other biological units from the same PDB ID
: 1ar7_1,1ar7_2,1ar7_3,1ar7_4,1ar7_5
UniProt ID
:
P03300
PubMed ID
:
9253417
Ligand
Ligand ID
:
III
Ligand name
: Peptide
Biological relevance
: Relevant
Download
mmCIF Format
Receptor
Ligand
PDB Format
Receptor
Ligand
Ligand ID
Name
III
Peptide
Binding affinity
Experimental affinity
N/A
Surface area
Surface area of receptor(A
2
)
N/A
Surface area of ligand(A
2
)
N/A
Surface area of complex(A
2
)
N/A
Interface area(A
2
)
N/A
Reference
Wei et al,
Q-BioLiP: A Comprehensive Resource for Quaternary Structure-based Protein–ligand Interactions
,
Genomics, Proteomics & Bioinformatics
, 22(1), qzae001, 2024. (
PDF
)