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Yang Lab
Function Annotation for BL5220
3D View
Ligand Information
Binding Information
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Binding residues
Residue number in mmCIF file:
B12:
S23 R72 S73 E74 S75 S76 I77 E78 S79 A82 R83
B13:
A43 L44
B44:
Y302
C2:
A6
C28:
A34 Y35 G36 V192 F193 P194
C50:
S10 D11 R12 L14 Q15 N30
D12:
A16 K41 N42
D13:
F55 F116 T117 F118 L119 F120 V154 I155 W156 D157 S162 S163 C164 T165 M166 I210 L211 G212 F213
D28:
G38
D43:
A90 S96 L100 G101 E102 I103 L104 N105 Y106 Y107 T108 H109 W110 A111 Y176 R177 T179 F220 S221 V222 R223 H230
D44:
P81 C84 S133 Y134 A135 P136 P141 P142 K143 K144 A148 T152 V168 G187 G188 Y189 I190 S191 F193
E11:
E13
E12:
K42 D44 F45 S46
E27:
S22 T23 I24 N25
E28:
D48 P49 S50 K51 F52 T53 E54 P55
E49:
G1 A2 Q3 V4 S5 S6
E50:
K57 D58 V59 L60 I61 P65 M66 L67
Residue number in PDB file:
112:
S23 R72 S73 E74 S75 S76 I77 E78 S79 A82 R83
113:
A43 L44
144:
Y302
22:
A6
228:
A34 Y35 G36 V192 F193 P194
250:
S10 D11 R12 L14 Q15 N30
312:
A16 K41 N42
313:
F55 F116 T117 F118 L119 F120 V154 I155 W156 D157 S162 S163 C164 T165 M166 I210 L211 G212 F213
328:
G38
343:
A90 S96 L100 G101 E102 I103 L104 N105 Y106 Y107 T108 H109 W110 A111 Y176 R177 T179 F220 S221 V222 R223 H230
344:
P81 C84 S133 Y134 A135 P136 P141 P142 K143 K144 A148 T152 V168 G187 G188 Y189 I190 S191 F193
411:
E14
412:
K43 D45 F46 S47
427:
S23 T24 I25 N26
428:
D49 P50 S51 K52 F53 T54 E55 P56
449:
G2 A3 Q4 V5 S6 S7
450:
K58 D59 V60 L61 I62 P66 M67 L68
Receptor
Assembly ID: 1ar7_6
Stoichiometry type
: Hetero 120-mer -A30B30C30D30
Assembly defined by
: crystal asymmetric unit
PDB ID
:
1ar7
Experimental method
: X-RAY DIFFRACTION
Resolution
: 2.9 Å
Other biological units from the same PDB ID
: 1ar7_1,1ar7_2,1ar7_3,1ar7_4,1ar7_5
UniProt ID
:
P03300
PubMed ID
:
9253417
Ligand
Ligand ID
:
III
Ligand name
: Peptide
Biological relevance
: Relevant
Download
mmCIF Format
Receptor
Ligand
PDB Format
Receptor
Ligand
Ligand ID
Name
III
Peptide
Binding affinity
Experimental affinity
N/A
Surface area
Surface area of receptor(A
2
)
N/A
Surface area of ligand(A
2
)
N/A
Surface area of complex(A
2
)
N/A
Interface area(A
2
)
N/A
Reference
Wei et al,
Q-BioLiP: A Comprehensive Resource for Quaternary Structure-based Protein–ligand Interactions
,
Genomics, Proteomics & Bioinformatics
, 22(1), qzae001, 2024. (
PDF
)