Function Annotation for BL51878



                                                                                          Spin

Receptor

Assembly ID: 2gkd_1

Stoichiometry type: Monomer -A1
Assembly defined by: Author
PDB ID: 2gkd
Experimental method: SOLUTION NMR
Resolution: N/A
UniProt ID: Q8KNF0
PubMed ID: 17168523

Ligand

Ligand ID: DNA
Ligand name: Deoxyribonucleic acid
Biological relevance: Relevant

Download

  

Ligand ID NUC pairing details Name
DNA A:DNA B:DNA Deoxyribonucleic acid


Binding affinity

Experimental affinity Kd=14uM, from PDBbind-CN

Surface area (A2)

Surface area of receptor 8016.43
Surface area of ligand 4233.76
Surface area of complex 11452.6
Interface area 398.8

Reference

  • Wei et al, Q-BioLiP: A Comprehensive Resource for Quaternary Structure-based Protein–ligand InteractionsGenomics, Proteomics & Bioinformatics, 22(1), qzae001, 2024. (PDF)