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Yang Lab
Function Annotation for BL51554
3D View
Ligand Information
Binding Information
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Binding residues
Residue numbering in mmCIF file:
C51:
S73 W75 K131 T176
D52:
D11 R12 V14
Residue numbering in PDB file:
B51:
S73 W75 K131 T176
C52:
D11 R12 V14
Receptor
Assembly ID: 2fz2_1
Stoichiometry type
: Hetero 180-mer -A179B1
Assembly defined by
: complete icosahedral assembly
PDB ID
:
2fz2
Experimental method
: X-RAY DIFFRACTION
Resolution
: 2.9 Å
Other biological units from the same PDB ID
: 2fz2_2,2fz2_3,2fz2_4,2fz2_5,2fz2_6
UniProt ID
:
P20125
PubMed ID
:
15780874
8784351
7716173
15321716
Ligand
Ligand ID
:
RNA
Ligand name
: Ribonucleic acid
Biological relevance
: Relevant
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mmCIF Format
Receptor
Ligand
PDB Format
Receptor
Ligand
Ligand ID
NUC pairing details
Name
RNA
A52:RNA
Ribonucleic acid
Binding affinity
Experimental affinity
N/A
Surface area
Surface area of receptor(A
2
)
N/A
Surface area of ligand(A
2
)
N/A
Surface area of complex(A
2
)
N/A
Interface area(A
2
)
N/A
Reference
Wei et al,
Q-BioLiP: A Comprehensive Resource for Quaternary Structure-based Protein–ligand Interactions
,
Genomics, Proteomics & Bioinformatics
, 22(1), qzae001, 2024. (
PDF
)