Function Annotation for BL49800




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Receptor

Assembly ID: 2c5f_1

Stoichiometry type: Homo 2-mer -A2
Assembly defined by: Author
PDB ID: 2c5f
Experimental method: X-RAY DIFFRACTION
Resolution: 2.6 Å
UniProt ID: P04058
PubMed ID: 16763558

Ligand

Ligand ID: CHH
Ligand name: N,n,n-trimethyl-n-(4-oxopentyl)ammonium
Biological relevance: Relevant

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Ligand ID Name SynonymsFormula 2D structure
CHH N,n,n-trimethyl-n-(4-oxopentyl)ammonium "C8 H18 N O" N/A


Binding affinity

Experimental affinity IC50=8.5 nm, from BindingDB
Predicted affinity N/A, show detail

Surface area (A2)

Surface area of receptor 38391.88
Surface area of ligand 321.24
Surface area of complex 38333.0
Interface area 190.06
Reference

  • Wei et al, Q-BioLiP: A Comprehensive Resource for Quaternary Structure-based Protein–ligand Interactions, Genomics, Proteomics & Bioinformatics, 22(1), qzae001, 2024. (PDF)