Home
Browse
Browse biologically relevant interactions
Browse biologically irrelevant interactions
Browse structures with ligands or proteins only
Search
Ligand
Q-SITE
Download
Statistics
Help
News
Yang Lab
Function Annotation for BL4936
3D View
Ligand Information
Binding Information
The structure is too big. Click
here
to show 3D view, it may take a long time or fail, depending on the status of the server.
Binding residues
Residue number in mmCIF file:
B29:
Y302
B42:
S23 R72 S73 E74 S75 S76 I77 E78 S79 F80 F81 A82 R83
B43:
A43 L44
C13:
V32 V33 A34 Y35 G36 F193 P194 H195
C25:
S10 D11 Q15 N30
D28:
M44 A90 S96 T98 M99 L100 G101 E102 I103 L104 N105 Y106 Y107 H109 W110 A111 Y176 R177 T179 F220 S221 V222 R223
D29:
D79 D80 P81 V132 S133 Y134 A135 P141 P142 K143 K144 A148 T152 H153 V168 G188 Y189 I190 S191 V192 F193
D42:
K41 N42 L225
D43:
F55 F116 T117 F118 L119 F120 V132 V154 I155 W156 D157 S162 S163 C164 T165 M166 I210 L211 G212 F213
E12:
T23 I24 N25 Y26 T27
E13:
S50 K51 F52 E54 P55
E24:
G1 A2 Q3 V4 S5
E25:
K57 D58 V59 L60 I61 P65 M66 L67
E41:
E13
E42:
K42 D44 F45 S46
Residue number in PDB file:
129:
Y302
142:
S23 R72 S73 E74 S75 S76 I77 E78 S79 F80 F81 A82 R83
143:
A43 L44
213:
V32 V33 A34 Y35 G36 F193 P194 H195
225:
S10 D11 Q15 N30
328:
M44 A90 S96 T98 M99 L100 G101 E102 I103 L104 N105 Y106 Y107 H109 W110 A111 Y176 R177 T179 F220 S221 V222 R223
329:
D79 D80 P81 V132 S133 Y134 A135 P141 P142 K143 K144 A148 T152 H153 V168 G188 Y189 I190 S191 V192 F193
342:
K41 N42 L225
343:
F55 F116 T117 F118 L119 F120 V132 V154 I155 W156 D157 S162 S163 C164 T165 M166 I210 L211 G212 F213
412:
T24 I25 N26 Y27 T28
413:
S51 K52 F53 E55 P56
424:
G2 A3 Q4 V5 S6
425:
K58 D59 V60 L61 I62 P66 M67 L68
441:
E14
442:
K43 D45 F46 S47
Receptor
Assembly ID: 1ar6_6
Stoichiometry type
: Hetero 120-mer -A30B30C30D30
Assembly defined by
: crystal asymmetric unit
PDB ID
:
1ar6
Experimental method
: X-RAY DIFFRACTION
Resolution
: 2.9 Å
Other biological units from the same PDB ID
: 1ar6_1,1ar6_2,1ar6_3,1ar6_4,1ar6_5
UniProt ID
:
P03300
PubMed ID
:
9253417
15299633
2994218
Ligand
Ligand ID
:
III
Ligand name
: Peptide
Biological relevance
: Relevant
Download
mmCIF Format
Receptor
Ligand
PDB Format
Receptor
Ligand
Ligand ID
Name
III
Peptide
Binding affinity
Experimental affinity
N/A
Surface area
Surface area of receptor(A
2
)
N/A
Surface area of ligand(A
2
)
N/A
Surface area of complex(A
2
)
N/A
Interface area(A
2
)
N/A
Reference
Wei et al,
Q-BioLiP: A Comprehensive Resource for Quaternary Structure-based Protein–ligand Interactions
,
Genomics, Proteomics & Bioinformatics
, 22(1), qzae001, 2024. (
PDF
)