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Yang Lab
Function Annotation for BL4932
3D View
Ligand Information
Binding Information
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Binding residues
Residue number in mmCIF file:
B13:
Y302
B43:
S23 R72 S73 E74 S75 S76 I77 E78 S79 F80 F81 A82 R83
B44:
A43 L44
C28:
S10 D11 Q15 N30
C50:
V32 V33 A34 Y35 G36 F193 P194 H195
D12:
M44 A90 S96 T98 M99 L100 G101 E102 I103 L104 N105 Y106 Y107 H109 W110 A111 Y176 R177 T179 F220 S221 V222 R223
D13:
D79 D80 P81 V132 S133 Y134 A135 P141 P142 K143 K144 A148 T152 H153 V168 G188 Y189 I190 S191 V192 F193
D43:
K41 N42 L225
D44:
F55 F116 T117 F118 L119 F120 V132 V154 I155 W156 D157 S162 S163 C164 T165 M166 I210 L211 G212 F213
E27:
G1 A2 Q3 V4 S5
E28:
K57 D58 V59 L60 I61 P65 M66 L67
E42:
E13
E43:
K42 D44 F45 S46
E49:
T23 I24 N25 Y26 T27
E50:
S50 K51 F52 E54 P55
Residue number in PDB file:
113:
Y302
143:
S23 R72 S73 E74 S75 S76 I77 E78 S79 F80 F81 A82 R83
144:
A43 L44
228:
S10 D11 Q15 N30
250:
V32 V33 A34 Y35 G36 F193 P194 H195
312:
M44 A90 S96 T98 M99 L100 G101 E102 I103 L104 N105 Y106 Y107 H109 W110 A111 Y176 R177 T179 F220 S221 V222 R223
313:
D79 D80 P81 V132 S133 Y134 A135 P141 P142 K143 K144 A148 T152 H153 V168 G188 Y189 I190 S191 V192 F193
343:
K41 N42 L225
344:
F55 F116 T117 F118 L119 F120 V132 V154 I155 W156 D157 S162 S163 C164 T165 M166 I210 L211 G212 F213
427:
G2 A3 Q4 V5 S6
428:
K58 D59 V60 L61 I62 P66 M67 L68
442:
E14
443:
K43 D45 F46 S47
449:
T24 I25 N26 Y27 T28
450:
S51 K52 F53 E55 P56
Receptor
Assembly ID: 1ar6_6
Stoichiometry type
: Hetero 120-mer -A30B30C30D30
Assembly defined by
: crystal asymmetric unit
PDB ID
:
1ar6
Experimental method
: X-RAY DIFFRACTION
Resolution
: 2.9 Å
Other biological units from the same PDB ID
: 1ar6_1,1ar6_2,1ar6_3,1ar6_4,1ar6_5
UniProt ID
:
P03300
PubMed ID
:
9253417
15299633
2994218
Ligand
Ligand ID
:
III
Ligand name
: Peptide
Biological relevance
: Relevant
Download
mmCIF Format
Receptor
Ligand
PDB Format
Receptor
Ligand
Ligand ID
Name
III
Peptide
Binding affinity
Experimental affinity
N/A
Surface area
Surface area of receptor(A
2
)
N/A
Surface area of ligand(A
2
)
N/A
Surface area of complex(A
2
)
N/A
Interface area(A
2
)
N/A
Reference
Wei et al,
Q-BioLiP: A Comprehensive Resource for Quaternary Structure-based Protein–ligand Interactions
,
Genomics, Proteomics & Bioinformatics
, 22(1), qzae001, 2024. (
PDF
)