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Yang Lab
Function Annotation for BL4906
3D View
Ligand Information
Binding Information
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Binding residues
Residue number in mmCIF file:
B26:
A43 L44
B30:
S23 R72 S73 E74 S75 S76 I77 E78 S79 F80 F81 A82 R83
C24:
S10 D11 Q15 N30
D26:
F55 F116 T117 F118 L119 F120 V132 V154 I155 W156 D157 S162 S163 C164 T165 M166 I210 L211 G212 F213
D30:
K41 N42 L225
E23:
G1 A2 Q3 V4 S5
E24:
K57 D58 V59 L60 I61 P65 M66 L67
E29:
E13
E30:
K42 D44 F45 S46
Residue number in PDB file:
126:
A43 L44
130:
S23 R72 S73 E74 S75 S76 I77 E78 S79 F80 F81 A82 R83
224:
S10 D11 Q15 N30
326:
F55 F116 T117 F118 L119 F120 V132 V154 I155 W156 D157 S162 S163 C164 T165 M166 I210 L211 G212 F213
330:
K41 N42 L225
423:
G2 A3 Q4 V5 S6
424:
K58 D59 V60 L61 I62 P66 M67 L68
429:
E14
430:
K43 D45 F46 S47
Receptor
Assembly ID: 1ar6_6
Stoichiometry type
: Hetero 120-mer -A30B30C30D30
Assembly defined by
: crystal asymmetric unit
PDB ID
:
1ar6
Experimental method
: X-RAY DIFFRACTION
Resolution
: 2.9 Å
Other biological units from the same PDB ID
: 1ar6_1,1ar6_2,1ar6_3,1ar6_4,1ar6_5
UniProt ID
:
P03300
PubMed ID
:
9253417
15299633
2994218
Ligand
Ligand ID
:
III
Ligand name
: Peptide
Biological relevance
: Relevant
Download
mmCIF Format
Receptor
Ligand
PDB Format
Receptor
Ligand
Ligand ID
Name
III
Peptide
Binding affinity
Experimental affinity
N/A
Surface area
Surface area of receptor(A
2
)
N/A
Surface area of ligand(A
2
)
N/A
Surface area of complex(A
2
)
N/A
Interface area(A
2
)
N/A
Reference
Wei et al,
Q-BioLiP: A Comprehensive Resource for Quaternary Structure-based Protein–ligand Interactions
,
Genomics, Proteomics & Bioinformatics
, 22(1), qzae001, 2024. (
PDF
)