Function Annotation for BL47165




                                                                                          Spin

Receptor

Assembly ID: 2bks_2

Stoichiometry type: Monomer -A1
Assembly defined by: Author
PDB ID: 2bks
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
UniProt ID: P00797
PubMed ID: 15837327

Ligand

Ligand ID: PZ1
Ligand name: (6r)-6-({[1-(3-hydroxypropyl)-1,7-dihydroquinolin-7-yl]oxy}methyl)-1-(4-{3-[(2-methoxybenzyl)oxy]propoxy}phenyl)piperazin-2-one
Biological relevance: Relevant

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Ligand ID Name SynonymsFormula 2D structure
PZ1 (6r)-6-({[1-(3-hydroxypropyl)-1,7-dihydroquinolin-7-yl]oxy}methyl)-1-(4-{3-[(2-methoxybenzyl)oxy]propoxy}phenyl)piperazin-2-one "C34 H41 N3 O6" N/A


Binding affinity

Experimental affinity ic50=37nM, from BindingMOAD
IC50=37 nm, from BindingDB
IC50=37nM, from PDBbind-CN
Predicted affinity 3.92 nM, show detail

Surface area (A2)

Surface area of receptor 14915.74
Surface area of ligand 854.62
Surface area of complex 14515.85
Interface area 627.26
Reference

  • Wei et al, Q-BioLiP: A Comprehensive Resource for Quaternary Structure-based Protein–ligand Interactions, Genomics, Proteomics & Bioinformatics, 22(1), qzae001, 2024. (PDF)