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Yang Lab
Function Annotation for BL417280
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Ligand Information
Binding Information
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Binding residues
Residue number in mmCIF file:
U12:
L501
W12:
Q67 M70 D71 S74 D78 D499 T500 L501 N502 Q525 H526 L562 S563 K565
Residue number in PDB file:
U12:
L501
W12:
Q67 M70 D71 S74 D78 D499 T500 L501 N502 Q525 H526 L562 S563 K565
Receptor
Assembly ID: 8w9p_1
Stoichiometry type
: Hetero 1380-mer -A780B360C120D119E1
Assembly defined by
: Author and software
PDB ID
:
8w9p
Experimental method
: ELECTRON MICROSCOPY
Resolution
: 5.7 Å
Other biological units from the same PDB ID
: 8w9p_2,8w9p_3,8w9p_4,8w9p_5
UniProt ID
:
A0A2H4QDD3
Q9YWN5
B4Y048
Q9INH3
W0G587
PubMed ID
:
38480794
Ligand
Ligand ID
:
III
Ligand name
: Peptide
Biological relevance
: Relevant
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mmCIF Format
Receptor
Ligand
PDB Format
Receptor
Ligand
Ligand ID
Name
III
Peptide
Binding affinity
Experimental affinity
N/A
Surface area
Surface area of receptor(A
2
)
N/A
Surface area of ligand(A
2
)
N/A
Surface area of complex(A
2
)
N/A
Interface area(A
2
)
N/A
Reference
Wei et al,
Q-BioLiP: A Comprehensive Resource for Quaternary Structure-based Protein–ligand Interactions
,
Genomics, Proteomics & Bioinformatics
, 22(1), qzae001, 2024. (
PDF
)