Function Annotation for BL39434




                                                                                          Spin

Receptor

Assembly ID: 1x0n_1

Stoichiometry type: Monomer -A1
Assembly defined by: Author
PDB ID: 1x0n
Experimental method: SOLUTION NMR
Resolution: N/A
UniProt ID: P62993
PubMed ID: N/A

Ligand

Ligand ID: DTF
Ligand name: 4-[(10s,14s,18s)-18-(2-amino-2-oxoethyl)-14-(1-naphthylmethyl)-8,17,20-trioxo-7,16,19-triazaspiro[5.14]icos-11-en-10-yl]benzylphosphonicacid
Biological relevance: Relevant

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Ligand ID Name SynonymsFormula 2D structure
DTF 4-[(10s,14s,18s)-18-(2-amino-2-oxoethyl)-14-(1-naphthylmethyl)-8,17,20-trioxo-7,16,19-triazaspiro[5.14]icos-11-en-10-yl]benzylphosphonicacid "C37 H45 N4 O7 P" N/A


Binding affinity

Experimental affinity IC50=20 nm, from BindingDB
IC50=20nM, from PDBbind-CN
Predicted affinity 0.22 uM, show detail

Surface area (A2)

Surface area of receptor 6996.59
Surface area of ligand 902.91
Surface area of complex 7079.56
Interface area 409.97
Reference

  • Wei et al, Q-BioLiP: A Comprehensive Resource for Quaternary Structure-based Protein–ligand Interactions, Genomics, Proteomics & Bioinformatics, 22(1), qzae001, 2024. (PDF)