Function Annotation for BL39190




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Receptor

Assembly ID: 1w88_1

Stoichiometry type: Hetero 5-mer -A2B2C1
Assembly defined by: Author and software
PDB ID: 1w88
Experimental method: X-RAY DIFFRACTION
Resolution: 2.3 Å
UniProt ID: P21873 P11961 P21874
PubMed ID: 15514159

Ligand

Ligand ID: TPP
Ligand name: Thiamine(1+) diphosphate(3-)
Biological relevance: Relevant

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Ligand ID Name SynonymsFormula 2D structure
TPP Thiamine(1+) diphosphate(3-) "C12 H19 N4 O7 P2 S" N/A


Binding affinity

Experimental affinity N/A
Predicted affinity 61.66 nM, show detail

Surface area (A2)

Surface area of receptor 43200.85
Surface area of ligand 591.53
Surface area of complex 42930.55
Interface area 430.91
Reference

  • Wei et al, Q-BioLiP: A Comprehensive Resource for Quaternary Structure-based Protein–ligand Interactions, Genomics, Proteomics & Bioinformatics, 22(1), qzae001, 2024. (PDF)