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Yang Lab
Function Annotation for BL374159
3D View
Ligand Information
Binding Information
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Binding residues
Residue number in mmCIF file:
LDA:
Q14 H15 W16 K17 S21 H24
MDA:
F279 G283
MIA:
L183
XA:
M1 V2 I3 S4 I5 N6 Q7 V8 R9 Q10 L11 Y12 V13 A14 K15 A16 L17 K18 G28 D29 I30 S45 S54 P203 L242 D245 L246 F249 C250 R254 V273 D283 H285 E299 K300 T301 I302 T303 L304 V305 A306 A317 L318
XTA:
D116 G144
YTA:
K210 E473
ZG:
N292
Residue number in PDB file:
A050:
M1 V2 I3 S4 I5 N6 Q7 V8 R9 Q10 L11 Y12 V13 A14 K15 A16 L17 K18 G28 D29 I30 S45 S54 P203 L242 D245 L246 F249 C250 R254 V273 D283 H285 E299 K300 T301 I302 T303 L304 V305 A306 A317 L318
A208:
N292
E066:
Q14 H15 W16 K17 S21 H24
E067:
F279 G283
E197:
L183
E494:
D116 G144
E495:
K210 E473
Receptor
Assembly ID: 8ckb_1
Stoichiometry type
: Hetero 1400-mer -A535B532C110D75E24F23G12H12I12J12K12L12M12N10O6P1
Assembly defined by
: Author
PDB ID
:
8ckb
Experimental method
: ELECTRON MICROSCOPY
Resolution
: 4.39 Å
UniProt ID
:
A0A385DVM6
A0A385DVS7
A0A385DVL5
A0A385DTH1
A0A385DVC3
A0A385DVD6
A0A385DV85
A0A385DVU6
A0A385DVT1
A0A385DV73
A0A385DTC5
A0A385DT87
A0A385DT91
A0A385DT68
A0A385DTA3
PubMed ID
: N/A
Ligand
Ligand ID
:
III
Ligand name
: Peptide
Biological relevance
: Relevant
Download
mmCIF Format
Receptor
Ligand
PDB Format
Receptor
Ligand
Ligand ID
Name
III
Peptide
Binding affinity
Experimental affinity
N/A
Surface area
Surface area of receptor(A
2
)
N/A
Surface area of ligand(A
2
)
N/A
Surface area of complex(A
2
)
N/A
Interface area(A
2
)
N/A
Reference
Wei et al,
Q-BioLiP: A Comprehensive Resource for Quaternary Structure-based Protein–ligand Interactions
,
Genomics, Proteomics & Bioinformatics
, 22(1), qzae001, 2024. (
PDF
)