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Yang Lab
Function Annotation for BL374133
3D View
Ligand Information
Binding Information
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Binding residues
Residue number in mmCIF file:
LTA:
R185
OLA:
K281 S282 G283
QUA:
F471
YQ:
S291 N292 E293 V295 Q296
ZJ:
N6 Q7 V8 R9 Q10 L11 Y12 A14 L17 F43 D55 I57 L63 P69 S70 E71 I243 V278 Y279 D280 V281 L282 D283 I284 H285 Y286 F287 Y288 N292 E293 S294 V295 Q296 K297 S298 E299 K300 T301 I302 T303 L304 V305 A306 V307 D308 D309 G310 S311 H312 T313 A314 M315 N316 A317 L318 I319 G320 T332 L333
Residue number in PDB file:
A286:
N6 Q7 V8 R9 Q10 L11 Y12 A14 L17 F43 D55 I57 L63 P69 S70 E71 I243 V278 Y279 D280 V281 L282 D283 I284 H285 Y286 F287 Y288 N292 E293 S294 V295 Q296 K297 S298 E299 K300 T301 I302 T303 L304 V305 A306 V307 D308 D309 G310 S311 H312 T313 A314 M315 N316 A317 L318 I319 G320 T332 L333
A467:
S291 N292 E293 V295 Q296
E277:
K281 S282 G283
E482:
R185
E513:
F471
Receptor
Assembly ID: 8ckb_1
Stoichiometry type
: Hetero 1400-mer -A535B532C110D75E24F23G12H12I12J12K12L12M12N10O6P1
Assembly defined by
: Author
PDB ID
:
8ckb
Experimental method
: ELECTRON MICROSCOPY
Resolution
: 4.39 Å
UniProt ID
:
A0A385DVM6
A0A385DVS7
A0A385DVL5
A0A385DTH1
A0A385DVC3
A0A385DVD6
A0A385DV85
A0A385DVU6
A0A385DVT1
A0A385DV73
A0A385DTC5
A0A385DT87
A0A385DT91
A0A385DT68
A0A385DTA3
PubMed ID
: N/A
Ligand
Ligand ID
:
III
Ligand name
: Peptide
Biological relevance
: Relevant
Download
mmCIF Format
Receptor
Ligand
PDB Format
Receptor
Ligand
Ligand ID
Name
III
Peptide
Binding affinity
Experimental affinity
N/A
Surface area
Surface area of receptor(A
2
)
N/A
Surface area of ligand(A
2
)
N/A
Surface area of complex(A
2
)
N/A
Interface area(A
2
)
N/A
Reference
Wei et al,
Q-BioLiP: A Comprehensive Resource for Quaternary Structure-based Protein–ligand Interactions
,
Genomics, Proteomics & Bioinformatics
, 22(1), qzae001, 2024. (
PDF
)