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Yang Lab
Function Annotation for BL357746
3D View
Ligand Information
Binding Information
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Binding residues
Residue number in mmCIF file:
D4:
D19 P48 T49 V50 P52 D55 L372 N644 Y646 L647 S648 K788 R872 S881 E921
E4:
Q30 F31 A34 T35 T37 Y38 R46 N47
F4:
M882
Residue number in PDB file:
D4:
D18 P47 T48 V49 P51 D54 L371 N643 Y645 L646 S647 K787 R871 S880 E920
E4:
Q29 F30 A33 T34 T36 Y37 R45 N46
F4:
M881
Receptor
Assembly ID: 7s78_3
Stoichiometry type
: Hetero 125-mer -A60B24C20D9E5F5G1H1
Assembly defined by
: icosahedral pentamer
PDB ID
:
7s78
Experimental method
: ELECTRON MICROSCOPY
Resolution
: 3.72 Å
Other biological units from the same PDB ID
: 7s78_1,7s78_2,7s78_4,7s78_5
UniProt ID
:
P24936
P12537
P04133
P24937
P03281
P12538
PubMed ID
:
34774568
Ligand
Ligand ID
:
III
Ligand name
: Peptide
Biological relevance
: Relevant
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mmCIF Format
Receptor
Ligand
PDB Format
Receptor
Ligand
Ligand ID
Name
III
Peptide
Binding affinity
Experimental affinity
N/A
Surface area
Surface area of receptor(A
2
)
N/A
Surface area of ligand(A
2
)
N/A
Surface area of complex(A
2
)
N/A
Interface area(A
2
)
N/A
Reference
Wei et al,
Q-BioLiP: A Comprehensive Resource for Quaternary Structure-based Protein–ligand Interactions
,
Genomics, Proteomics & Bioinformatics
, 22(1), qzae001, 2024. (
PDF
)