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Yang Lab
Function Annotation for BL357411
3D View
Ligand Information
Binding Information
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Binding residues
Residue number in mmCIF file:
J47:
Q30 A34 T35 T37 Y38 R46 N47
K47:
M882
L47:
D19 P48 V50 P52 H54 D55 N644 Y646 L647 R676 R872 E921
Residue number in PDB file:
J47:
Q29 A33 T34 T36 Y37 R45 N46
K47:
M881
L47:
D18 P47 V49 P51 H53 D54 N643 Y645 L646 R675 R871 E920
Receptor
Assembly ID: 7s78_1
Stoichiometry type
: Hetero 1500-mer -A720B299C240D119E60F60G1H1
Assembly defined by
: complete icosahedral assembly
PDB ID
:
7s78
Experimental method
: ELECTRON MICROSCOPY
Resolution
: 3.72 Å
Other biological units from the same PDB ID
: 7s78_2,7s78_3,7s78_4,7s78_5
UniProt ID
:
P24936
P12537
P04133
P24937
P03281
P12538
PubMed ID
:
34774568
Ligand
Ligand ID
:
III
Ligand name
: Peptide
Biological relevance
: Relevant
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mmCIF Format
Receptor
Ligand
PDB Format
Receptor
Ligand
Ligand ID
Name
III
Peptide
Binding affinity
Experimental affinity
N/A
Surface area
Surface area of receptor(A
2
)
N/A
Surface area of ligand(A
2
)
N/A
Surface area of complex(A
2
)
N/A
Interface area(A
2
)
N/A
Reference
Wei et al,
Q-BioLiP: A Comprehensive Resource for Quaternary Structure-based Protein–ligand Interactions
,
Genomics, Proteomics & Bioinformatics
, 22(1), qzae001, 2024. (
PDF
)