Home
Browse
Browse biologically relevant interactions
Browse biologically irrelevant interactions
Browse structures with ligands or proteins only
Search
Ligand
Q-SITE
Download
Statistics
Help
News
Yang Lab
Function Annotation for BL357407
3D View
Ligand Information
Binding Information
The structure is too big. Click
here
to show 3D view, it may take a long time or fail, depending on the status of the server.
Binding residues
Residue number in mmCIF file:
D41:
D19 P48 T49 V50 P52 D55 L372 N644 Y646 L647 S648 K788 R872 S881 E921
E41:
Q30 F31 A34 T35 T37 Y38 R46 N47
F41:
M882
Residue number in PDB file:
D41:
D18 P47 T48 V49 P51 D54 L371 N643 Y645 L646 S647 K787 R871 S880 E920
E41:
Q29 F30 A33 T34 T36 Y37 R45 N46
F41:
M881
Receptor
Assembly ID: 7s78_1
Stoichiometry type
: Hetero 1500-mer -A720B299C240D119E60F60G1H1
Assembly defined by
: complete icosahedral assembly
PDB ID
:
7s78
Experimental method
: ELECTRON MICROSCOPY
Resolution
: 3.72 Å
Other biological units from the same PDB ID
: 7s78_2,7s78_3,7s78_4,7s78_5
UniProt ID
:
P24936
P12537
P04133
P24937
P03281
P12538
PubMed ID
:
34774568
Ligand
Ligand ID
:
III
Ligand name
: Peptide
Biological relevance
: Relevant
Download
mmCIF Format
Receptor
Ligand
PDB Format
Receptor
Ligand
Ligand ID
Name
III
Peptide
Binding affinity
Experimental affinity
N/A
Surface area
Surface area of receptor(A
2
)
N/A
Surface area of ligand(A
2
)
N/A
Surface area of complex(A
2
)
N/A
Interface area(A
2
)
N/A
Reference
Wei et al,
Q-BioLiP: A Comprehensive Resource for Quaternary Structure-based Protein–ligand Interactions
,
Genomics, Proteomics & Bioinformatics
, 22(1), qzae001, 2024. (
PDF
)