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Yang Lab
Function Annotation for BL357386
3D View
Ligand Information
Binding Information
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Binding residues
Residue number in mmCIF file:
D29:
S21 V29 Q30 A32 R33 T37 Y38 L41 N42 F45 R46 N47
F29:
D19 E22 P48 T49 V50 P52 N644 Y646 R676 R872 E921 F923
Residue number in PDB file:
D29:
S20 V28 Q29 A31 R32 T36 Y37 L40 N41 F44 R45 N46
F29:
D18 E21 P47 T48 V49 P51 N643 Y645 R675 R871 E920 F922
Receptor
Assembly ID: 7s78_1
Stoichiometry type
: Hetero 1500-mer -A720B299C240D119E60F60G1H1
Assembly defined by
: complete icosahedral assembly
PDB ID
:
7s78
Experimental method
: ELECTRON MICROSCOPY
Resolution
: 3.72 Å
Other biological units from the same PDB ID
: 7s78_2,7s78_3,7s78_4,7s78_5
UniProt ID
:
P24936
P12537
P04133
P24937
P03281
P12538
PubMed ID
:
34774568
Ligand
Ligand ID
:
III
Ligand name
: Peptide
Biological relevance
: Relevant
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mmCIF Format
Receptor
Ligand
PDB Format
Receptor
Ligand
Ligand ID
Name
III
Peptide
Binding affinity
Experimental affinity
N/A
Surface area
Surface area of receptor(A
2
)
N/A
Surface area of ligand(A
2
)
N/A
Surface area of complex(A
2
)
N/A
Interface area(A
2
)
N/A
Reference
Wei et al,
Q-BioLiP: A Comprehensive Resource for Quaternary Structure-based Protein–ligand Interactions
,
Genomics, Proteomics & Bioinformatics
, 22(1), qzae001, 2024. (
PDF
)