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Yang Lab
Function Annotation for BL352228
3D View
Ligand Information
Binding Information
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Binding residues
Residue number in mmCIF file:
P14:
A20 S21 L24 A32 R33 D36 S40 L41 G42 N43 F45 R46 N47
R14:
D55 L359 T619 S632 F633 N634 Y636 L637 S638 R666 G667 W668 S669 M860 R862 A874 V909 E911 F913
Residue number in PDB file:
D14:
A20 S21 L24 A32 R33 D36 S40 L41 G42 N43 F45 R46 N47
F14:
D55 L359 T619 S632 F633 N634 Y636 L637 S638 R666 G667 W668 S669 M860 R862 A874 V909 E911 F913
Receptor
Assembly ID: 7rd1_1
Stoichiometry type
: Hetero 1200-mer -A720B238C120D60E60F1G1
Assembly defined by
: complete icosahedral assembly
PDB ID
:
7rd1
Experimental method
: ELECTRON MICROSCOPY
Resolution
: 3.07 Å
Other biological units from the same PDB ID
: 7rd1_2,7rd1_3,7rd1_4,7rd1_5
UniProt ID
:
G9G854
G9G860
G9G843
G9G849
G9G848
G9G853
PubMed ID
:
34851659
Ligand
Ligand ID
:
III
Ligand name
: Peptide
Biological relevance
: Relevant
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mmCIF Format
Receptor
Ligand
PDB Format
Receptor
Ligand
Ligand ID
Name
III
Peptide
Binding affinity
Experimental affinity
N/A
Surface area
Surface area of receptor(A
2
)
N/A
Surface area of ligand(A
2
)
N/A
Surface area of complex(A
2
)
N/A
Interface area(A
2
)
N/A
Reference
Wei et al,
Q-BioLiP: A Comprehensive Resource for Quaternary Structure-based Protein–ligand Interactions
,
Genomics, Proteomics & Bioinformatics
, 22(1), qzae001, 2024. (
PDF
)