Function Annotation for BL34104




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Receptor

Assembly ID: 1syo_1

Stoichiometry type: Homo 2-mer -A2
Assembly defined by: Author
PDB ID: 1syo
Experimental method: X-RAY DIFFRACTION
Resolution: 2.2 Å
UniProt ID: P08169
PubMed ID: 15169779

Ligand

Ligand ID: M6P
Ligand name: Alpha-d-mannose 6-phosphate
Biological relevance: Relevant

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Ligand ID Name SynonymsFormula 2D structure
M6P Alpha-d-mannose 6-phosphate "C6 H13 O9 P" N/A


Binding affinity

Experimental affinity Kd~1nM, from BindingMOAD
Kd~1nM, from PDBbind-CN
Predicted affinity N/A, show detail

Surface area (A2)

Surface area of receptor 37107.56
Surface area of ligand 402.91
Surface area of complex 37042.81
Interface area 233.83
Reference

  • Wei et al, Q-BioLiP: A Comprehensive Resource for Quaternary Structure-based Protein–ligand Interactions, Genomics, Proteomics & Bioinformatics, 22(1), qzae001, 2024. (PDF)