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Yang Lab
Function Annotation for BL3388
3D View
Ligand Information
Binding Information
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Binding residues
Residue number in mmCIF file:
E57:
G1 A2 Q3 V4 S5 S6
Residue number in PDB file:
457:
G2 A3 Q4 V5 S6 S7
Receptor
Assembly ID: 1al2_1
Stoichiometry type
: Hetero 240-mer -A60B60C60D60
Assembly defined by
: complete icosahedral assembly
PDB ID
:
1al2
Experimental method
: X-RAY DIFFRACTION
Resolution
: 2.9 Å
Other biological units from the same PDB ID
: 1al2_2,1al2_3,1al2_4,1al2_5,1al2_6
UniProt ID
:
P03300
PubMed ID
:
9253417
Ligand
Ligand ID
:
III
Ligand name
: Peptide
Biological relevance
: Relevant
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mmCIF Format
Receptor
Ligand
PDB Format
Receptor
Ligand
Ligand ID
Name
III
Peptide
Binding affinity
Experimental affinity
N/A
Surface area
Surface area of receptor(A
2
)
N/A
Surface area of ligand(A
2
)
N/A
Surface area of complex(A
2
)
N/A
Interface area(A
2
)
N/A
Reference
Wei et al,
Q-BioLiP: A Comprehensive Resource for Quaternary Structure-based Protein–ligand Interactions
,
Genomics, Proteomics & Bioinformatics
, 22(1), qzae001, 2024. (
PDF
)