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Yang Lab
Function Annotation for BL325793
3D View
Ligand Information
Binding Information
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Binding residues
Residue number in mmCIF file:
A17:
I1 E2 S3 I4 I5 S55 L58 E60 N61 D116 P185 K244 H245 P251
B16:
P26 C27
B17:
D18 S20 S21 A22 P23 L25 P26 V40 R41 N42 E45 Q48 V49
B18:
D18
B19:
Y5
B20:
G1 V2
C17:
N30 Y31 C32 C33 Y35
Residue number in PDB file:
A17:
I1 E2 S3 I4 I5 S55 L58 E60 N61 D116 P185 K244 H245 P251
B16:
P26 C27
B17:
D18 S20 S21 A22 P23 L25 P26 V40 R41 N42 E45 Q48 V49
B18:
D18
B19:
Y5
B20:
G1 V2
C17:
N30 Y31 C32 C33 Y35
Receptor
Assembly ID: 7ebr_1
Stoichiometry type
: Hetero 300-mer -A60B60C60D60E60
Assembly defined by
: complete icosahedral assembly
PDB ID
:
7ebr
Experimental method
: ELECTRON MICROSCOPY
Resolution
: 3.6 Å
Other biological units from the same PDB ID
: 7ebr_2,7ebr_3,7ebr_4,7ebr_5
UniProt ID
:
A0A097BW12
J9Z449
PubMed ID
:
34006855
Ligand
Ligand ID
:
III
Ligand name
: Peptide
Biological relevance
: Relevant
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mmCIF Format
Receptor
Ligand
PDB Format
Receptor
Ligand
Ligand ID
Name
III
Peptide
Binding affinity
Experimental affinity
N/A
Surface area
Surface area of receptor(A
2
)
N/A
Surface area of ligand(A
2
)
3438.11
Surface area of complex(A
2
)
3438.11
Interface area(A
2
)
N/A
Reference
Wei et al,
Q-BioLiP: A Comprehensive Resource for Quaternary Structure-based Protein–ligand Interactions
,
Genomics, Proteomics & Bioinformatics
, 22(1), qzae001, 2024. (
PDF
)