Function Annotation for BL30284



                                                                                          Spin

Receptor

Assembly ID: 1rkj_1

Stoichiometry type: Monomer -A1
Assembly defined by: Author
PDB ID: 1rkj
Experimental method: SOLUTION NMR
Resolution: N/A
UniProt ID: P08199
PubMed ID: 15033352

Ligand

Ligand ID: RNA
Ligand name: Ribonucleic acid
Biological relevance: Relevant

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Ligand ID NUC pairing details Name
RNA A:RNA Ribonucleic acid


Binding affinity

Experimental affinity Kd=1.1uM, from PDBbind-CN

Surface area (A2)

Surface area of receptor 12112.53
Surface area of ligand 4816.62
Surface area of complex 14822.44
Interface area 1053.36

Reference

  • Wei et al, Q-BioLiP: A Comprehensive Resource for Quaternary Structure-based Protein–ligand InteractionsGenomics, Proteomics & Bioinformatics, 22(1), qzae001, 2024. (PDF)