Function Annotation for BL29807




                                                                                          Spin

Receptor

Assembly ID: 1r5g_1

Stoichiometry type: Monomer -A1
Assembly defined by: Author
PDB ID: 1r5g
Experimental method: X-RAY DIFFRACTION
Resolution: 2.0 Å
UniProt ID: P50579
PubMed ID: 15012983

Ligand

Ligand ID: AO1
Ligand name: (2s,3r)-3-amino-2-hydroxy-5-(ethylsulfanyl)pentanoyl-((s)-(-)-(1-naphthyl)ethyl)amide
Biological relevance: Relevant

Download

  

Ligand ID Name SynonymsFormula 2D structure
AO1 (2s,3r)-3-amino-2-hydroxy-5-(ethylsulfanyl)pentanoyl-((s)-(-)-(1-naphthyl)ethyl)amide "C19 H26 N2 O2 S" N/A


Binding affinity

Experimental affinity IC50=0.03uM, from PDBbind-CN
Predicted affinity 0.53 uM, show detail

Surface area (A2)

Surface area of receptor 16210.73
Surface area of ligand 536.21
Surface area of complex 15989.38
Interface area 378.78
Reference

  • Wei et al, Q-BioLiP: A Comprehensive Resource for Quaternary Structure-based Protein–ligand Interactions, Genomics, Proteomics & Bioinformatics, 22(1), qzae001, 2024. (PDF)