Function Annotation for BL27409




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Receptor

Assembly ID: 1q90_2

Stoichiometry type: Hetero 36-mer -A4B4C4D4E4F4G4H4I4
Assembly defined by: Software
PDB ID: 1q90
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å
UniProt ID: Q00471 P23230 P49728 Q08362 P50369 Q42496 P23577 P0C1D4
PubMed ID: 14647374 11796719

Ligand

Ligand ID: SQD
Ligand name: 1,2-di-o-acyl-3-o-[6-deoxy-6-sulfo-alpha-d-glucopyranosyl]-sn-glycerol
Biological relevance: Irrelevant

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Ligand ID Name SynonymsFormula 2D structure
SQD 1,2-di-o-acyl-3-o-[6-deoxy-6-sulfo-alpha-d-glucopyranosyl]-sn-glycerol "C41 H78 O12 S" N/A


Binding affinity

Experimental affinity N/A
Predicted affinity N/A, show detail

Surface area (A2)

Surface area of receptor 168640.14
Surface area of ligand 763.65
Surface area of complex 168602.12
Interface area 400.84
Reference

  • Wei et al, Q-BioLiP: A Comprehensive Resource for Quaternary Structure-based Protein–ligand Interactions, Genomics, Proteomics & Bioinformatics, 22(1), qzae001, 2024. (PDF)