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Yang Lab
Function Annotation for BL260691
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Ligand Information
Binding Information
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Binding residues
Residue number in mmCIF file:
B44:
L133 N134 T138 R139 L145 A148 T149 N150 A152 L153 Y156 P363 H365 V372 H374
D44:
L68 N70 R71 N73 W74 E78 Y156 I160 S161 N164 R354 Y355 T356 K357 G358 M359 L360
F44:
T54 G55
Residue number in PDB file:
A44:
L68 N70 R71 N73 W74 E78 Y156 I160 S161 N164 R354 Y355 T356 K357 G358 M359 L360
D44:
L133 N134 T138 R139 L145 A148 T149 N150 A152 L153 Y156 P363 H365 V372 H374
F44:
T54 G55
Receptor
Assembly ID: 6ib1_1
Stoichiometry type
: Hetero 420-mer -A240B180
Assembly defined by
: complete icosahedral assembly
PDB ID
:
6ib1
Experimental method
: ELECTRON MICROSCOPY
Resolution
: 3.5 Å
Other biological units from the same PDB ID
: 6ib1_2,6ib1_3,6ib1_4,6ib1_5
UniProt ID
: N/A
PubMed ID
:
31663016
Ligand
Ligand ID
:
III
Ligand name
: Peptide
Biological relevance
: Relevant
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mmCIF Format
Receptor
Ligand
PDB Format
Receptor
Ligand
Ligand ID
Name
III
Peptide
Binding affinity
Experimental affinity
N/A
Surface area
Surface area of receptor(A
2
)
N/A
Surface area of ligand(A
2
)
3598.06
Surface area of complex(A
2
)
3598.06
Interface area(A
2
)
N/A
Reference
Wei et al,
Q-BioLiP: A Comprehensive Resource for Quaternary Structure-based Protein–ligand Interactions
,
Genomics, Proteomics & Bioinformatics
, 22(1), qzae001, 2024. (
PDF
)