Home
Browse
Browse biologically relevant interactions
Browse biologically irrelevant interactions
Browse structures with ligands or proteins only
Search
Ligand
Q-SITE
Download
Statistics
Help
News
Yang Lab
Function Annotation for BL260616
3D View
Ligand Information
Binding Information
The structure is too big. Click
here
to show 3D view, it may take a long time or fail, depending on the status of the server.
Binding residues
Residue number in mmCIF file:
B3:
L63 D65 F131 L133 N134 T138 R139 L145 A148 T149 N150 A152 L153 G154 Y156 P363 H365 V372
D3:
A67 L68 N70 N73 E78 Y156 I160 S161 N164 R354 Y355 T356 K357 G358 M359
F3:
T54 G55
Residue number in PDB file:
A3:
L63 D65 F131 L133 N134 T138 R139 L145 A148 T149 N150 A152 L153 G154 Y156 P363 H365 V372
D3:
A67 L68 N70 N73 E78 Y156 I160 S161 N164 R354 Y355 T356 K357 G358 M359
F3:
T58 G59
Receptor
Assembly ID: 6iat_1
Stoichiometry type
: Hetero 420-mer -A240B180
Assembly defined by
: complete icosahedral assembly
PDB ID
:
6iat
Experimental method
: ELECTRON MICROSCOPY
Resolution
: 3.3 Å
Other biological units from the same PDB ID
: 6iat_2,6iat_3,6iat_4,6iat_5
UniProt ID
: N/A
PubMed ID
:
31663016
Ligand
Ligand ID
:
III
Ligand name
: Peptide
Biological relevance
: Relevant
Download
mmCIF Format
Receptor
Ligand
PDB Format
Receptor
Ligand
Ligand ID
Name
III
Peptide
Binding affinity
Experimental affinity
N/A
Surface area
Surface area of receptor(A
2
)
N/A
Surface area of ligand(A
2
)
3511.8
Surface area of complex(A
2
)
3511.8
Interface area(A
2
)
N/A
Reference
Wei et al,
Q-BioLiP: A Comprehensive Resource for Quaternary Structure-based Protein–ligand Interactions
,
Genomics, Proteomics & Bioinformatics
, 22(1), qzae001, 2024. (
PDF
)