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Yang Lab
Function Annotation for BL252506
3D View
Ligand Information
Binding Information
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Binding residues
Residue number in mmCIF file:
A54:
D167 Q169 R170 N171
B54:
N36 L38 L39 Q41 Y43 D47 Y97 Q98 D100 N101 T142 V150 R151 P152 K154 Y159
C54:
D269 Y271
Residue number in PDB file:
A54:
D181 Q183 R184 N185
B54:
N76 L78 L79 Q81 Y83 D87 Y137 Q138 D140 N141 T182 V190 R191 P192 K194 Y199
C54:
D269 Y271
Receptor
Assembly ID: 6egx_1
Stoichiometry type
: Hetero 180-mer -A60B60C60
Assembly defined by
: complete icosahedral assembly
PDB ID
:
6egx
Experimental method
: ELECTRON MICROSCOPY
Resolution
: 4.06 Å
Other biological units from the same PDB ID
: 6egx_2,6egx_3,6egx_4,6egx_5
UniProt ID
:
A0A2I6HDZ6
Q9WCE9
Q9IGK7
A0A223DN66
PubMed ID
:
29987012
Ligand
Ligand ID
:
III
Ligand name
: Peptide
Biological relevance
: Relevant
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mmCIF Format
Receptor
Ligand
PDB Format
Receptor
Ligand
Ligand ID
Name
III
Peptide
Binding affinity
Experimental affinity
N/A
Surface area
Surface area of receptor(A
2
)
N/A
Surface area of ligand(A
2
)
2814.69
Surface area of complex(A
2
)
2814.69
Interface area(A
2
)
N/A
Reference
Wei et al,
Q-BioLiP: A Comprehensive Resource for Quaternary Structure-based Protein–ligand Interactions
,
Genomics, Proteomics & Bioinformatics
, 22(1), qzae001, 2024. (
PDF
)