Function Annotation for BL24672




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Receptor

Assembly ID: 1oth_1

Stoichiometry type: Homo 3-mer -A3
Assembly defined by: Author and software
PDB ID: 1oth
Experimental method: X-RAY DIFFRACTION
Resolution: 1.85 Å
UniProt ID: P00480
PubMed ID: 9852088

Ligand

Ligand ID: PAO
Ligand name: N-(phosphonoacetyl)-l-ornithine
Biological relevance: Relevant

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Ligand ID Name SynonymsFormula 2D structure
PAO N-(phosphonoacetyl)-l-ornithine "C7 H15 N2 O6 P" N/A


Binding affinity

Experimental affinity Ki=0.1uM, from PDBbind-CN
Predicted affinity 0.76 uM, show detail

Surface area (A2)

Surface area of receptor 35079.02
Surface area of ligand 437.02
Surface area of complex 34950.91
Interface area 282.56
Reference

  • Wei et al, Q-BioLiP: A Comprehensive Resource for Quaternary Structure-based Protein–ligand Interactions, Genomics, Proteomics & Bioinformatics, 22(1), qzae001, 2024. (PDF)