Function Annotation for BL21706




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Receptor

Assembly ID: 1nd5_2

Stoichiometry type: Homo 2-mer -A2
Assembly defined by: Author and software
PDB ID: 1nd5
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
UniProt ID: P15309
PubMed ID: 12525165

Ligand

Ligand ID: 2BF
Ligand name: Alpha-benzyl-aminobenzyl-phosphonic acid
Biological relevance: Relevant

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Ligand ID Name SynonymsFormula 2D structure
2BF Alpha-benzyl-aminobenzyl-phosphonic acid "C14 H16 N O3 P" N/A


Binding affinity

Experimental affinity IC50=4 nm, from BindingDB
IC50=4nM, from PDBbind-CN
Predicted affinity 0.45 uM, show detail

Surface area (A2)

Surface area of receptor 29348.95
Surface area of ligand 457.66
Surface area of complex 29189.68
Interface area 308.47
Reference

  • Wei et al, Q-BioLiP: A Comprehensive Resource for Quaternary Structure-based Protein–ligand Interactions, Genomics, Proteomics & Bioinformatics, 22(1), qzae001, 2024. (PDF)