Function Annotation for BL21692




                                                                                          Spin

Receptor

Assembly ID: 1nd5_1

Stoichiometry type: Homo 3-mer -A3
Assembly defined by: Author
PDB ID: 1nd5
Experimental method: X-RAY DIFFRACTION
Resolution: 2.9 Å
UniProt ID: P15309
PubMed ID: 12525165

Ligand

Ligand ID: 2BF
Ligand name: Alpha-benzyl-aminobenzyl-phosphonic acid
Biological relevance: Relevant

Download

  

Ligand ID Name SynonymsFormula 2D structure
2BF Alpha-benzyl-aminobenzyl-phosphonic acid "C14 H16 N O3 P" N/A


Binding affinity

Experimental affinity IC50=4 nm, from BindingDB
IC50=4nM, from PDBbind-CN
Predicted affinity 1.25 uM, show detail

Surface area (A2)

Surface area of receptor 45442.69
Surface area of ligand 448.02
Surface area of complex 45268.33
Interface area 311.19
Reference

  • Wei et al, Q-BioLiP: A Comprehensive Resource for Quaternary Structure-based Protein–ligand Interactions, Genomics, Proteomics & Bioinformatics, 22(1), qzae001, 2024. (PDF)