Function Annotation for BL215233



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Receptor

Assembly ID: 5kl8_1

Stoichiometry type: Hetero 2-mer -A1B1
Assembly defined by: Author and software
PDB ID: 5kl8
Experimental method: X-RAY DIFFRACTION
Resolution: 4.0 Å
UniProt ID: P25724 P25822
PubMed ID: 27482653

Ligand

Ligand ID: RNA
Ligand name: Ribonucleic acid
Biological relevance: Relevant

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Ligand ID NUC pairing details Name
RNA C:RNA Ribonucleic acid


Binding affinity

Experimental affinity Kd=12nM, from PDBbind-CN

Surface area (A2)

Surface area of receptor 22021.11
Surface area of ligand 3480.74
Surface area of complex 22001.68
Interface area 1750.08

Reference

  • Wei et al, Q-BioLiP: A Comprehensive Resource for Quaternary Structure-based Protein–ligand Interactions, Genomics, Proteomics & Bioinformatics, 22(1), qzae001, 2024. (PDF)