Function Annotation for BL192738



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Receptor

Assembly ID: 5e8i_1

Stoichiometry type: Homo 2-mer -A2
Assembly defined by: Author and software
PDB ID: 5e8i
Experimental method: X-RAY DIFFRACTION
Resolution: 3.45 Å
UniProt ID: Q01543
PubMed ID: 26618620

Ligand

Ligand ID: DNA
Ligand name: Deoxyribonucleic acid
Biological relevance: Relevant

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Ligand ID NUC pairing details Name
DNA B:DNA C:DNA Deoxyribonucleic acid


Binding affinity

Experimental affinity Kd=16nM, from PDBbind-CN

Surface area (A2)

Surface area of receptor 10525.71
Surface area of ligand 3923.69
Surface area of complex 12665.28
Interface area 892.06

Reference

  • Wei et al, Q-BioLiP: A Comprehensive Resource for Quaternary Structure-based Protein–ligand Interactions, Genomics, Proteomics & Bioinformatics, 22(1), qzae001, 2024. (PDF)